Table 4.
Classification and comparison of the C2H2 ZNF genes hosting highly-expressed TE exons
| TE | N1 | N2 | N3 | N4 | p |
|---|---|---|---|---|---|
| Alu |
850 |
51 |
143 |
17 |
7.65E-04 |
| CR1 |
11 |
0 |
4 |
0 |
NA |
| ERV1 |
29 |
0 |
13 |
0 |
NA |
| ERVL |
19 |
1 |
6 |
1 |
0.00E + 00 |
| L1 |
148 |
12 |
24 |
5 |
4.71E-03 |
| L2 |
79 |
7 |
34 |
5 |
2.27E-02 |
| MaLR |
57 |
1 |
18 |
1 |
0.00E + 00 |
| MER1 |
40 |
2 |
13 |
1 |
1.00E-01 |
| MER2 |
37 |
2 |
15 |
2 |
0.00E + 00 |
| MIR |
132 |
4 |
56 |
3 |
3.04E-02 |
| Other_DNA | 4 | 0 | 1 | 0 | NA |
TE: the categories of exonized TEs. N1: the number of the genes hosting TE exons. N2: the number of C2H2 ZNF genes hosting TE exons. N3: the number of genes hosting the highly-expressed TE exons. N4: the number of C2H2 ZNF genes hosting the highly-expressed TE exons. Among the 327 highly-expressed TE exons, 115 are included in the UCSC RefGene table.