Table 1.
Class name |
Number of cell lines |
Total binding sites | |
---|---|---|---|
Required | Available | ||
Any CTCF |
Any |
56 |
458,251 |
CTCF in one cell line |
1 |
56 |
241,300 |
cCTCF1 |
≥51 |
56 |
23,709 |
cRad211 |
6 |
6 |
22,055 |
cSmc31 |
4 |
4 |
16,704 |
cCTCF/cRad21 |
≥51/6 |
56/6 |
16,689 |
cCTCF/cSmc3 |
≥51/4 |
56/4 |
13,261 |
cCTCF/cCohesin | ≥51/6/4 | 56/6/4 | 12,014 |
1To be declared constitutive, a site had to be identified in ≥90% of available cell lines.