Table 1.
DGE-tag unique clean tags and tags percentage that map to genes in the four developmental stages of H. armigera and H. assulta
| Embryos | Larva | Pupa | Adult | Total | ||
|---|---|---|---|---|---|---|
| Raw data |
H. armigera |
6,202,369 |
5,766,391 |
6,126,237 |
6,021,919 |
24,116,916 |
|
H. assulta |
6,072,324 |
6,161,560 |
6,195,186 |
5,876,709 |
24,305,779 |
|
| Clean tags |
H. armigera |
6,058,338 |
5,646,953 |
5,998,625 |
5,891,808 |
23,595,724 |
|
H. assulta |
5,955,877 |
6,048,552 |
6,084,239 |
5,759,082 |
23,847,750 |
|
| Unique clean tags (Uni-tags) |
H. armigera |
97,646 |
80,673 |
89,193 |
89,330 |
356,842 |
|
H. assulta |
93,672 |
88,171 |
88,711 |
86,860 |
357,414 |
|
| Uni-tag mapping to gene |
H. armigera |
71,623 |
64,679 |
64,458 |
67,385 |
268,145 |
|
H. assulta |
61,518 |
60,287 |
55,503 |
53,283 |
230,591 |
|
| Mapping tag ratio (%) |
H. armigera |
73.35% |
80.17% |
72.27% |
75.43% |
75.14% |
|
H. assulta |
65.67% |
68.37% |
62.57% |
61.34% |
64.52% |
|
| Gene numbers of tag mapping |
H. armigera |
22,890 |
21,080 |
21,987 |
22,901 |
88,857 |
|
H. assulta |
19,106 |
19,006 |
18,340 |
18,705 |
75,157 |
|
| Mapping gene ratio (%) |
H. armigera |
34.27% |
31.56% |
32.92% |
34.29% |
|
| H. assulta | 28.61% | 28.46% | 27.46% | 28.01% |