Table 4.
qPCR expression values for the selected 15 genes
|
Gene name |
Supratentorial |
Infratentorial |
ΔCt median |
I. vs. S. |
||
|---|---|---|---|---|---|---|
| ΔCt | 2-ΔΔCt | ΔCt | 2-ΔΔCt | p-value | ||
| ABBA1 |
2.19 |
1.46 |
2.88 |
0.9 |
2.72 |
- |
| APOD |
-1.33 |
0.69 |
-2.46 |
1.6 |
-1.87 |
- |
|
ARX |
6.03 |
2.46 |
8.25 |
0.53 |
7.33 |
0.03 |
|
CXCL14 |
0.84 |
12.61 |
7.17 |
0.18 |
4.5 |
0.009 |
| FOSB |
4.15 |
0.98 |
3.84 |
1.27 |
4.11 |
- |
| FOXG1 |
4.65 |
0.7 |
3.38 |
1.69 |
4.14 |
- |
|
GPR17 |
2.85 |
1.52 |
8.18 |
0.04 |
3.43 |
0.0049 |
|
LHX2 |
4.6 |
7.59 |
9.04 |
0.35 |
7.52 |
0.01 |
| NRXN2 |
6.28 |
1.18 |
6.52 |
0.99 |
6.51 |
- |
|
PTGD2S |
1.34 |
1.66 |
5.4 |
0.1 |
2.08 |
0.0049 |
| SDC3 |
2.9 |
0.94 |
1.79 |
2.03 |
2.81 |
- |
| SNX22 |
6.98 |
0.73 |
6.34 |
1.11 |
6.5 |
- |
| SPOCK1 |
3.99 |
0.88 |
3.06 |
1.69 |
3.81 |
- |
| TIMP4 |
2.62 |
0.92 |
2.42 |
1.05 |
2.48 |
- |
| ZFHX4 | -0.43 | 0.85 | -0.84 | 1 | -0.84 | - |
qPCR values for dataset 1 (34 samples) and 2 (18 samples). Gene expressions were significantly different for all listed genes by multivariate analysis (RLS). The genes in bold are those passing the Mann–Whitney test (only its significant p-values are reported on the right column). S: Supratentorial, I: Infratentorial.