Table 2.
Primary GWAS top results (P-values <1E-05)
| SNP | CHR | BP | Reference allele | Frequency | Rsq | BETA | SE | P-value | Gene |
|---|---|---|---|---|---|---|---|---|---|
| rs848788 |
3 |
126011114 |
C |
0.36 |
0.97 |
−0.28 |
0.06 |
7.2E-07 |
ITGB5 |
| rs6731443 |
2 |
228105810 |
G |
0.55 |
1.00 |
−0.25 |
0.05 |
2.5E-06 |
AGFG1 |
| rs13382948 |
2 |
228127201 |
A |
0.45 |
1.00 |
0.25 |
0.05 |
2.6E-06 |
AGFG1 |
| rs10189795 |
2 |
228087105 |
C |
0.45 |
1.00 |
0.25 |
0.05 |
3.8E-06 |
AGFG1 |
| rs4861175 |
4 |
41932655 |
A |
0.18 |
1.00 |
−0.32 |
0.07 |
4.9E-06 |
- |
| rs614664 |
3 |
125969683 |
A |
0.37 |
1.00 |
−0.25 |
0.06 |
6.0E-06 |
ITGB5 |
| rs702036 |
3 |
125983762 |
A |
0.63 |
0.98 |
0.25 |
0.06 |
7.1E-06 |
ITGB5 |
| rs296282 |
5 |
106163683 |
C |
0.22 |
0.56 |
0.38 |
0.09 |
8.0E-06 |
- |
| rs4972983 |
2 |
228101412 |
A |
0.57 |
1.00 |
−0.24 |
0.05 |
9.0E-06 |
AGFG1 |
| rs7592613 |
2 |
228159434 |
C |
0.61 |
1.00 |
−0.24 |
0.05 |
9.3E-06 |
AGFG1 |
| rs11683662 |
2 |
228156272 |
A |
0.61 |
1.00 |
−0.24 |
0.05 |
9.3E-06 |
AGFG1 |
| rs7579157 |
2 |
228153974 |
C |
0.39 |
1.00 |
0.24 |
0.05 |
9.4E-06 |
AGFG1 |
| rs7595130 |
2 |
228151796 |
A |
0.39 |
1.00 |
0.24 |
0.05 |
9.5E-06 |
AGFG1 |
| rs11674314 |
2 |
228150452 |
C |
0.39 |
1.00 |
0.24 |
0.05 |
9.6E-06 |
AGFG1 |
| rs4129709 |
2 |
228146793 |
A |
0.61 |
1.00 |
−0.24 |
0.05 |
9.7E-06 |
AGFG1 |
| rs4485561 | 2 | 228081927 | G | 0.43 | 1.00 | 0.24 | 0.05 | 9.8E-06 | AGFG1 |