Table 3.
Descriptive and correlation analysis of the candidate RGs obtained by BestKeeper
| ABL1 | ACTB | CDKN1A | GADPH | GUSB | HPRT1 | HSP90 | IPO8 | PPIA | RPL30 | RPL4 | RPLPO | TBP | |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
|
n |
41 |
42 |
42 |
41 |
42 |
41 |
42 |
42 |
42 |
42 |
42 |
42 |
42 |
|
gM[Ct] |
28.05 |
23.73 |
28.54 |
25.39 |
31.20 |
29.02 |
26.81 |
29.10 |
22.12 |
28.78 |
25.88 |
24.86 |
28.70 |
|
aM[Ct] |
28.07 |
23.75 |
28.57 |
25.42 |
31.23 |
29.04 |
26.84 |
29.11 |
22.15 |
28.81 |
25.90 |
24.88 |
28.71 |
|
min[Ct] |
25.90 |
21.80 |
26.43 |
23.02 |
27.75 |
26.63 |
24.30 |
27.48 |
19.91 |
26.34 |
23.79 |
22.91 |
27.28 |
|
max[Ct] |
30.39 |
25.87 |
31.23 |
27.80 |
34.06 |
31.91 |
29.55 |
30.64 |
24.53 |
31.06 |
27.98 |
26.66 |
31.55 |
|
SD[± Ct] |
0.87 |
0.73 |
1.05 |
1.05 |
0.99 |
0.91 |
0.86 |
0.65 |
0.82 |
1.09 |
0.77 |
0.81 |
0.75 |
|
CV[% Ct] |
3.10 |
3,07 |
3.69 |
4.11 |
3.17 |
3.13 |
3.19 |
2.22 |
3.71 |
3.78 |
2.98 |
3.27 |
2.62 |
|
min[x-fold] |
−3.62 |
−3.36 |
−4.00 |
−4.33 |
−10.12 |
−4.17 |
−5.66 |
−2.76 |
−4.17 |
−4.53 |
−3.79 |
−3.37 |
−2.62 |
|
max [x-fold] |
4.04 |
3.85 |
5.85 |
4.41 |
6.78 |
5.64 |
6.62 |
2.61 |
4.73 |
4.11 |
3.82 |
3.06 |
6.15 |
| SD [± x-fold] | 1.68 | 1.55 | 1.88 | 1.87 | 1.81 | 1.72 | 1.67 | 1.47 | 1.63 | 1.96 | 1.61 | 1.66 | 1.59 |
Geometric mean of Ct (gM [Ct]), arithmetic mean (aM [Ct]), minimum and maximum values of Ct (min [Ct], max [Ct]), standard deviation of Ct (SD [± Ct]), coefficient of variance expressed as a percentage on the Ct level (CV [% Ct]), extreme values of expression levels expressed as an absolute x-fold over- or under- regulation coefficient (min [x-fold], max [x-fold]), and standard deviation of the absolute regulation coefficients (SD [± x-fold]).