Table 5.
Classification | Claudin-1* (59) | Claudin-2+ (17, 416) | Claudin-4 (57, 146) | Claudin-5 (395) | Claudin-7 (6) | Claudin-10a (373) | Claudin-15 (57) | Claudin-16 (143) | Claudin-17 (196) |
---|---|---|---|---|---|---|---|---|---|
F | R31A no effect on HCV entry | R31T no effect | |||||||
E | Y35A no effect on HCV entry | Y35C located at vestibule | R32D reduce Cl− selectivity | ||||||
C? | D38A abolish HCV entry | D38R reduce Cl− barrier | D104S reduce Na+ selectivity | ||||||
F | D105S reduce Na+ selectivity slightly | ||||||||
F | E108T no effect | ||||||||
F | E48Q no effect | E46K no effect | R114T no effect | ||||||
B | G49A abolish HCV entry | ||||||||
B | L50A abolish HCV entry | ||||||||
B | W51A abolish HCV entry | ||||||||
F | S53A no effect on HCV entry | E53Q no effect | E53K reduce Cl− barrier slightly | E119T reduce Na+ selectivity slightly | |||||
B | C54A abolish HCV entry | C54S loss of Na+ barrier | |||||||
E | H57C located at vestibule | D55R confer Cl− selectivity | |||||||
B | C64A abolish HCV entry | C64S loss of Na+ and mannitol barrier | |||||||
C | D65N abolish Na+ binding site | K65D, K65T confer Na+ selectivity | R59D reduce Cl− selectivity | E64K confer Cl− selectivity | D132S no effect | K65E and K65A abolish Cl− selectivity | |||
D | I66C exposed to pore lumen | E133T no effect | |||||||
F | D68N no effect | D135S no effect | |||||||
F | D76N no effect | D76N no effect | |||||||
A | R81T weak ER expression | R149L/T weak ER expression |
Classification refers to tentative assignment of role at each position: A, conserved residue essential for expression, trafficking, and presumably for global protein folding; B, conserved residue essential for claudin function at the plasma membrane; C, charged residue that acts as intrapore binding site; D, other pore-lining residue; E, residue at vestibule which may confer surface charge effects; F, residue that appears nonessential.
Claudin function assessed by ability to mediate cellular entry of hepatitis C virus (HCV).
Residue locations inferred based on accessibility to and block by methanethiosulfonate reagents. Reference numbers are given in parentheses.