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. 2008 Sep 1;39(3):477–483. doi: 10.1590/S1517-838220080003000012

Table 1.

The primers used for detection of the various genes by PCR, the amplicon size and relevant references.

Gene Primer Oligonucleotide pairs (5´→3´) Amplicon (bp) Reference
LT LTA-1 GGCGACAGATTATACCGTGC 696 Schultsz
LTA-2 CCGAATTCTGTTATATATGTC et al., 1994
STa STI-1 TTAATAGCACCCGGTACAAGCAGG 147 Olsvik
STI-2 CTTGACTCTTCAAAAGAGAAAATTAC et al., 1993
STb STb-1 ATCGCATTTCTTCTTGCATC 172 Blanco
STb-2 GGGCGCCAAAGCATGCTCC et al., 1997
VTl VT1-A GAAGAGTCCGTGGGATTACG 130 Pollard
VT1-B AGCGATGCAGCTATTAATAA et al., 1990
VT2 VT2–3 CCGTCAGGACTGTCTGAAAC 726 Woodward
VT2–5 GAGTCTGACAGGCAACTGTC et al., 1992
pap pap-1 GCAACAGCAACGCTGGTTGCATCAT 336 Yamamoto
pap-2 AGAGAGAGCCACTCTTATACGGACA et al., 1995
hly hly-1 AACAAGGATAAGCACTGTTCTGGCT 1177 Yamamoto
hly-2 ACCATATAAGCGGTCATTCCCGTCA et al. 1995
iuc iuc-1 TACCGGATTGTCATATGCAGACCGT 602 Yamamoto
iuc-2 AATATCTTCCTCCAGTCCGGAGAAG et al.,1995
cnf cnf1 AAGATGGAGTTTCCTATGCAGGAG 498 Yamamoto
cnf2 CATTCAGAGTCCTGCCCTCATTATT et al.,1995
sfa sfa-1 CTCCGGAGAACTGGGTGCATCTTAC 410 Yamamoto
sfa-2 CGGAGGAGTAATTACAAACCTGGCA et al. 1995
afa afa-1 GCTGGGCAGCAAACTGATAACCTC 750 Yamamoto
afa-2 CATCAAGCTGTTTGTTCGTCCGCCG et al.1995