Table II. The number of unique peptides identified via various fragmentation methods with FDR < 1%.
| UVPD (−) | ETD (+) | CID (+) | HCD (+) | |
|---|---|---|---|---|
| Halo | 3663 | 1220 | 6088 | 7335 |
| HeLa | 2350 | 1228 | 9716 | 10,121 |
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