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. Author manuscript; available in PMC: 2014 Apr 1.
Published in final edited form as: Obesity (Silver Spring). 2013 May 29;21(10):2099–2111. doi: 10.1002/oby.20324

Table 4. Association of lymphocyte expression levels of prioritized genes with MetS phenotypes at 3q27 QTL.

For gene prioritization strategy, see text. SNP associations with phenotypes are depicted in Table 2. The values shown represent the level of significance (p-value) of association between prioritized gene transcript levels and MetS phenotypes.

Phenotype ATP11B FGF12 IGF2BP2 LPP MCF2L2 NLGN1 TBL1XR1
Body composition and insulin responsiveness weight 0.51 0.35 0.00 0.62 0.96 0.18 1.00
height 0.17 0.14 0.12 0.97 1.00 0.31 0.00
BMI 1.00 0.89 0.00 0.74 0.36 0.21 0.34
WC 0.44 0.63 0.00 0.69 0.73 0.68 0.34
HC 0.01 0.57 0.01 0.50 0.63 0.80 0.28
WHR 0.02 0.39 0.12 0.37 0.51 0.92 0.69
Fatkg 0.61 0.73 0.02 0.34 0.84 0.16 0.09
Fatpct 0.93 0.96 0.27 0.48 0.18 0.18 0.65
Leankg 0.14 0.70 0.00 0.86 0.33 0.10 0.01
Leanpct 0.93 1.00 0.26 0.43 0.25 0.16 0.55
SubQF 0.82 0.28 0.06 0.74 0.84 NA 0.96
VF 0.81 0.28 0.21 0.91 0.83 NA 0.89
TAF 0.86 0.24 0.11 0.80 0.94 NA 0.86
RQ 0.18 0.90 0.01 0.22 0.06 NA 0.84
REE 0.81 0.63 0.00 0.20 0.45 NA 0.52
REE/weight 0.24 0.99 0.09 0.03 0.12 NA 0.29
REE/leanmass 0.43 0.86 0.38 0.08 0.93 NA 0.31
FG 0.57 0.77 0.21 0.71 0.74 0.04 0.83
FI 0.73 0.12 0.68 0.05 0.81 0.85 0.13
IGR 0.55 0.20 0.68 0.05 0.99 0.58 0.13
HOMA 0.79 0.15 0.40 0.06 0.67 0.41 0.16
SI 0.07 0.13 0.04 0.67 0.04 NA 0.64
SG 0.83 0.51 0.17 0.75 0.37 NA 0.62
AIR 0.19 0.15 0.45 0.94 0.98 NA 0.31
DI 0.18 0.26 0.02 0.49 0.83 0.57 0.73

Lipids/lipoprotein profiles and
cardiovascular performance
TG 0.46 0.35 0.90 0.01 0.30 0.44 0.62
TC 0.64 0.91 0.12 0.94 0.77 0.45 0.84
LDL-c 0.45 0.68 0.02 0.60 0.35 0.86 0.17
cal. LDL-c 0.50 0.58 0.76 0.67 0.62 0.75 0.95
HDL-c 0.20 0.35 0.08 0.02 0.64 0.15 0.67
HMED 0.81 0.97 0.02 0.49 0.60 0.08 0.56
LMEDn 0.81 0.93 0.10 0.67 0.44 0.46 0.76
LDLppd 0.56 0.58 0.03 0.89 0.01 0.31 0.35
BMED 0.88 0.50 0.19 0.90 0.04 0.86 0.65
sBP 0.40 0.51 0.07 0.79 0.45 0.45 0.83
dBP 0.79 0.25 0.71 0.62 0.37 0.49 0.67
Pulse 0.67 0.70 0.56 0.36 0.23 0.30 0.00

Adipokine
and
cytokines
Adiponectin 0.22 0.30 0.05 0.37 0.92 0.57 0.84
Lepin 0.76 0.61 0.05 0.73 0.10 0.77 0.40
TNF-alpha 0.90 0.81 0.94 0.32 0.95 0.45 0.63
IL-1β 0.58 0.59 0.59 0.04 1.00 0.57 0.81
IL-6 0.34 0.87 0.57 0.82 0.42 0.84 0.79