Table 2.
Putative QTLs for WBK and DTH in RILs population
| Traits | QTL | Chr | Nearest marker | 2006 (F7) | 2008 (F8) | ||||||
|---|---|---|---|---|---|---|---|---|---|---|---|
|
|
|
||||||||||
| LOD | AEa | r2 b | Thresholdc | LOD | AE | r2 | Threshold | ||||
| WBK | qWB3 | 3 | RM4383 | 5.18 | −3.11 | 10.6 | 3.26 | 3.34 | |||
| qWB4 | 4 | RM3288 | 4.30 | −2.42 | 6.5 | ||||||
| qWB6 | 6 | RM8125 | 18.11 | −5.40 | 31.5 | 21.70 | −8.13 | 36.8 | |||
| qWB9 | 9 | RM2482 | 7.63 | 4.35 | 10.7 | ||||||
| KW | qKW3-1 | 3 | RM7365 | 4.56 | −0.26 | 8.9 | 3.54 | 3.82 | −0.23 | 7.4 | 3.37 |
| qKW3-2 | 3 | RM3513 | 4.53 | −0.21 | 5.9 | ||||||
| qKW6 | 6 | RM5314 | 3.76 | 0.20 | 6.0 | ||||||
| qKW7 | 7 | RM505 | 3.53 | 0.21 | 6.6 | ||||||
| qKW10 | 10 | RM2371 | 5.09 | 0.23 | 7.9 | ||||||
| DTH | qDH1 | 1 | RM151 | 4.54 | 5.08 | −0.22 | 19.1 | 3.76 | |||
| qDH3 | 3 | RM5172 | 4.98 | −0.53 | 11.7 | ||||||
| qDH6 | 6 | RM1369 | 5.30 | 0.68 | 8.4 | 8.22 | 0.54 | 12.1 | |||
WBK, white-back kernels; KW, 1,000 kernel weight; DTH, days-to-heading.
a
Additive effect of the HE allele.
b
Percentage of total phenotypic variance explained by the QTL.
c
Significant threshold LOD value (P 0.05) determined from 1000 permutations.