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. 2013 Sep 12;8(9):e74396. doi: 10.1371/journal.pone.0074396

Table 2. Nucleotide differences for mitochondrial markers CO1 and ATP6.

mtDNA
CO1
ATP6
mtDNA combined
CO1 (n=126) ATP6 (n=54) 11 22 133 463 576 725 785 CO1+ATP6 (n=54)
C1 A1 A T A T T T T C1A1 (n=18)
C1 A2 . . . . C . C C1A2 (n=1)
C2 A1 . . . C . . . C2A1 (n=5)
C3 A1 . A . C . . . C3A1 (n=1)
C4 A3 . . G C C C . C4A3 (n=1)
C5 A1 . A G C . . . C5A1 (n=3)
C5 A2 . A G C C . C C5A2 (n=19)
C6 A2 G A G C C . C C6A2 (n=6)

Nucleotide differences in mitochondrial markers Cytochrome Oxidase I (CO1) and adenosine triphosphate synthase subunit 6 (ATP6). Six haplotypes (C1-C6) are found for the CO1 fragment (basepairs 1-544; n=126) with a total of four variable sites. Three haplotypes (A1-A3) are found for the ATP6 fragment (basepairs 545-989; n=54) with a total of three variable sites. Eight different haplotypes are found when the CO1 and ATP6 markers combined (e.g. C1A1, basepairs 1-989; n=54).