Table 7.
Signs of log-odds ratios at P1 and P3′ for cCP and iCP*
| AA | cCP |
iCP |
||
| P1 | P3′ | P1 | P3′ | |
| Ala | + | + | + | + |
| Cys | − | − | − | − |
| Asp | + | + | − | − |
| Glu | + | + | − | − |
| Phe | − | − | + | − |
| Gly | − | + | − | + |
| His | − | − | − | − |
| Ile | + | − | + | − |
| Lys | − | + | − | − |
| Leu | + | + | + | + |
| Met | − | − | − | − |
| Asn | − | − | − | + |
| Arg | − | − | − | − |
| Pro | − | − | − | − |
| Arg | − | − | − | − |
| Ser | − | − | − | − |
| Thr | − | − | − | − |
| Val | + | + | − | + |
| Trp | − | − | − | − |
| Tyr | + | − | + | − |
*
Signs of log-odds ratios reflect the preference of the position for the amino acid (AA) i; i.e., ‘+’ implies that AA i at this position is beneficial to the usage of the cleavage site, whereas ‘−’ implies it is not