Table 3. Frequencies of single and mixed P. vivax alleles.
| Pvmsp3α alleles | No. of infections N = 186) | Allele frequency | COI | |||||
|---|---|---|---|---|---|---|---|---|
| Single genotype infections | A_1_12 | 1 | 0.0054 | 73.7% single infections | ||||
| A_3_11 | 2 | 0.0108 | ||||||
| A_3_12 | 1 | 0.0054 | ||||||
| A_3_6 | 9 | 0.0484 | ||||||
| A_3_7 | 1 | 0.0054 | ||||||
| A_4_1 | 1 | 0.0054 | ||||||
| A_4_13 | 1 | 0.0054 | ||||||
| A_4_4 | 21 | 0.1129 | ||||||
| A_4_5 | 1 | 0.0054 | ||||||
| A_4_6 | 1 | 0.0054 | ||||||
| A_5_1 | 31 | 0.1667 | ||||||
| A_5_10 | 1 | 0.0054 | ||||||
| A_5_15 | 1 | 0.0054 | ||||||
| A_5_5 | 1 | 0.0054 | ||||||
| A_5_8 | 8 | 0.0430 | ||||||
| A_6_14 | 1 | 0.0054 | ||||||
| A_6_2 | 1 | 0.0054 | ||||||
| A_6_4 | 32 | 0.1720 | ||||||
| A_6_7 | 1 | 0.0054 | ||||||
| B_1_12 | 18 | 0.0968 | ||||||
| C_1_14 | 3 | 0.0161 | ||||||
| Mixed genotype infections appearing at one sample point | A_5_1 | + | A,B_5_4 | 1 | 0.0054 | 26.3% mixed infections | ||
| A_6_4 | + | A_4_4 | + | A,B_2_12 | 1 | 0.0054 | ||
| A_5_8 | + | B_6_12 | 1 | 0.0054 | ||||
| A_5_1 | + | A_10_13 | 1 | 0.0054 | ||||
| A_5_6 | A_5_1 | + | A_6_4 | 1 | 0.0054 | |||
| A_5_1 | + | A_6_4 | 8 * | 0.0431 | ||||
| A_5_14 | + | A_5_1 | + | A_6_4 | 1 † | 0.0054 | ||
| A_6_11 | + | A_6_4 | + | A_5_1 | 1 † | 0.0054 | ||
| A,B_5_3 | 1 | 0.0054 | ||||||
| A,B_5_4 | 1 | 0.0054 | ||||||
| A,B_6_4 | 1 | 0.0054 | ||||||
| A_9_1 | 2 | 0.0108 | ||||||
| A_9_15 | 4 | 0.0215 | ||||||
| A_9_4 | 1 | 0.0054 | ||||||
| A_10_5 | 3 | 0.0161 | ||||||
| A_10_9 | 1 | 0.0054 | ||||||
| A_11_1 | 1 | 0.0054 | ||||||
| A_12_1 | 1 | 0.0054 | ||||||
| A_13_1 | 1 | 0.0054 | ||||||
| B_6_12 | 1 | 0.0054 | ||||||
| Mixed genotype infections observed caused by multiple sampling over time | A_5_1 | + | A_3_11 | 1 | 0.0054 | |||
| A_5_1 | + | A_3_6 | 1 | 0.0054 | ||||
| A_3_13 | + | A_3_6 | 1 | 0.0054 | ||||
| A_4_4 | + | A_3_6 | 1 | 0.0054 | ||||
| A_5_8 | + | A_3_6 | 1 | 0.0054 | ||||
| A_8_4 | + | A_4_4 | 1 | 0.0054 | ||||
| A_5_8 | + | A_4_4 | 2 | 0.0108 | ||||
| A_6_4 | + | A_5_1 | 1 | 0.0054 | ||||
| A_6_14 | + | A_6_4 | 1 | 0.0054 | ||||
| A_6_7 | + | A_6_4 | 1 | 0.0054 | ||||
| B_1_12 | + | A_6_4 | 2 | 0.0108 | ||||
| C_1_14 | + | C_1_4 | 1 | 0.0054 | ||||
| C_7_4 | + | C_3_4 | 1 | 0.0054 | ||||
| A_6_4 | + | A_5_8 | + | A_4_4 | 1 | 0.0054 | ||
Bold is used to show known mixed infections or infections mixed by the third determinant.
*
Our analysis assumes that the observed A_10_1 and A_10_4 genotypes (infections classified mixed by the third determinant in the study) are a mixed infection of A_5_1 + A_6_4.
†
A_6_4 or A_5_1 was added in place of A_10_1.