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. Author manuscript; available in PMC: 2013 Sep 16.
Published in final edited form as: J Med Chem. 2011 Sep 8;54(19):6612–6623. doi: 10.1021/jm2004283

Table 1.

Average over the last ~98 ns of MD simulation for the 1 inhibitor within FAAH and in water.

δ θ τ χN
Mnr A −6.42 (±0.03) 6.63 (±0.03) 13.01 (±0.03) 23.15 (±0.05)
Mnr B −6.29 (±0.03) 3.38 (±0.02) 11.01 (±0.03) 22.34 (±0.05)
FAAH −6.35 (±0.03) 5.00 (±0.02) 12.01 (±0.02) 22.75 (±0.04)
Water box 0.41 (±0.04) 0.21 (±0.02) 8.51 (±0.02) 16.81 (±0.04)

δ: R2NCNH dihedral angle.θ: improper torsion centered on the secondary amine nitrogen. τ: mean twisting angle between the CN bond. χN: out-of plane bending angle, measure of the degree of pyramidalization at the N atom. The standard error of the mean is reported in brackets. Angles are expressed in degrees.