Table 4.
Enriched GO categories for K-means clusters
Cluster 1 |
Voltage-gated sodium channel activity |
Alcohol dehydrogenase activity |
Oxidoreductase activity\acting on the aldehyde or oxo group of donors |
Aminomethyltransferase activity |
Carboxylic acid metabolism |
Steroid biosynthesis |
Cell cycle arrest |
Negative regulation of caspase activity |
Estrogen metabolism |
Glucuronosyltransferase activity |
Xenobiotic metabolism |
Neurotransmitter uptake |
Serine-type endopeptidase inhibitor activity |
Cluster 2 |
Establishment of chromosome localization |
G2 phase of the mitotic cell cycle |
Mitosis |
Spindle organization and biogenesis |
Nucleosome assembly |
Phosphoinositide-mediated signaling |
Fatty acid β-oxidation |
Microspike biogenesis |
Pyrimidine deoxyribonucleotide biosynthesis |
Racemase and epimerase activity |
Response to DNA damage stimulus |
Ribose phosphate diphosphokinase activity |
Cluster 3 |
1-Phosphatidylinositol-4-phosphate 5-kinase activity |
Chemokine activity |
Chemotaxis |
Cyclin-dependent protein kinase inhibitor activity |
Endosome organization and biosynthesis |
NAD+ ADP-ribosyltransferase activity |
Negative regulation of transcription, DNA dependent |
Regulation of transcription from RNA polymerase II promoter |
Transcriptional repressor acitivity |
Response to unfolded protein |
Trans-1,2-dihydrobenzene-1,2-diol dehydrogenase activity |
Transition metal ion binding |
Ubiquitin cycle |
Ubiquitin-dependent protein catabolism |
Ubiquitin-protein ligase activity |
Cluster 4 |
Cell adhesion |
Cluster 5 |
Transition metal ion binding |
Cluster 6 |
cAMP-dependent protein kinase regulator activity |
Detection of stimulus during sensory perception |
Histamine receptor activity |
Regulation of neurotransmitter levels |
Synaptic transmission\cholinergic |
Cluster 7 |
Apical junction assembly |
Cytoskeletal protein binding |
Myofibril assembly |
Establishment and/or maintenance of chromatin architecture |
Regulation of cell growth |
Positive regulation of cell proliferation |
S100β binding |
Glycerol kinase activity |
Glycerol-3-phosphate metabolism |
GTPase activator activity |
Regulation of GTPase activity |
IκB kinase/NF-κB cascade |
PKC inhibitor activity |
Pyridine nucleotide biosynthesis |
Cluster 8 |
Bile acid catabolism |
Glutathione transferase activity |
Hemoglobin binding |
Lipid transporter activity |
Lipoprotein metabolism |
Polysaccharide biosynthesis |
Blood pressure regulation |
Wound healing |
Cluster 9 |
Collagen catabolism |
Peptidoglycan metabolism |
IGF binding |
Regulation of cell growth |
MAPK phosphatase activity |
Myeloid cell differentiation |
Protein dimerization activity |
Protein folding |
Response to unfolded protein |
Cluster 10 |
Nucleosome assembly |
Serine family amino acid metabolism |
Cluster 11 |
Activation of MAPKKK activity |
Alkanesulfonate biosynthesis |
Cysteine metabolism |
Negative regulation of apoptosis |
Cell cycle arrest |
Regulation of cyclin-dependent protein kinase acitivity |
Cell fate determination |
Notch binding |
Cell motility |
Growth factor activity |
Chemokine activity |
Inorganic anion exchanger activity |
LDL receptor activity |
Phosphofructokinase activity |
Protein dimerization activity |
Protein kinase inhibitor activity |
Cluster 12 |
Cell migration |
Immune response |
Transmembrane receptor acitivity |
Potassium ion binding |
Voltage-gated potassium channel activity |