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. Author manuscript; available in PMC: 2014 Jan 1.
Published in final edited form as: Ann Appl Stat. 2013;7(2):989–1009. doi: 10.1214/12-AOAS615

Table 1. Matches from an alignment of the secondary structures of 2VLW (X) and 1FAS (Y).

Match x y prob ∥x∥/∥y∥ prob (no scale) prob (global scale) f^0
1 1 1 0.989 2.41 0.869 0.983 0.17
2 2 2 0.945 2.70 0.701 0.958 0.15
3 3 3 0.968 1.62 0.347 0.965 0.08
4 4 4 0.980 1.59 0.414 0.970 0.10
5 5 5 0.924 1.02 0.672 0.512 0.98