Table 4.
Family | Approach | Similarity measure correlation | Resolution | ||
---|---|---|---|---|---|
EC | PFAM | Seq Sim | |||
Annotation | Resnik-Nmax | 0.34355 | 0.43796 | 0.55437 | 0.40935 |
Resnik-Nunif | 0.34355 | 0.43796 | 0.55437 | 0.33651 | |
Nunivers | 0.32079 | 0.40931 | 0.53991 | 0.95526 | |
Lin | 0.29912 | 0.38851 | 0.4998 | 0.96253 | |
Li et al. | 0.32110 | 0.40980 | 0.54062 | 0.95511 | |
Relevance | 0.30183 | 0.39132 | 0.50435 | 0.96131 | |
GraSM-Lin | 0.30463 | 0.38749 | 0.51142 | 0.95896 | |
GraSM-Nmax | 0.36341 | 0.45946 | 0.60546 | 0.40677 | |
GraSM-Nunif | 0.36341 | 0.45946 | 0.60546 | 0.33439 | |
GraSM-Nunivers | 0.32473 | 0.41170 | 0.55626 | 0.95247 | |
XGraSM-Lin | 0.30812 | 0.39642 | 0.57390 | 0.95087 | |
XGraSM-Nmax | 0.37079 | 0.47364 | 0.68564 | 0.39428 | |
XGraSM-Nunif | 0.37079 | 0.47364 | 0.68564 | 0.32412 | |
XGraSM-Nunivers | 0.32451 | 0.41225 | 0.59762 | 0.94673 | |
| |||||
Topology | Wang et al. | 0.34404 | 0.39297 | 0.61451 | 0.94019 |
Zhang et al. | 0.00477 | 0.00246 | 0.00188 | 0.36749 | |
GO-universal | 0.15787 | 0.19982 | 0.13119 | 1.00000 |