Table 6. Probes and primers for sequencing used in the present study.
Name | Sequence | Location* |
---|---|---|
Pr1 (sense) | 5’-GTATGATACCCGCTGCTTTGA-3’ | nt. 8253-8272 |
Pr2 (sense) | 5’-TTCACGGAGGCTATGAC-3’ | nt. 8613-8629 |
Pr2 (antisense) | 5’-GTCATAGCCTCCGTGAA-3’ | nt. 8629-8613 |
R56_1 (antisense) | 5’-CTGGAGAGTAACTGTGGAG-3’ | nt. 9036-9018 |
Primers used in direct-sequencing by Sanger method and ultra-deep sequencing of HCV NS5B region. * The location of primers corresponding to Con1.