Table 3.
Step | Parameter | Value | Description |
---|---|---|---|
1 | Plate cells | 45 μL | 5,000 PC3 cells |
2 | Incubation time | Overnight | 37°C, 5% CO2 |
3 | Control | 5 μL | DMSO |
4 | Library compounds | 5 μL | DZNep, RBC124 |
5 | Incubation time | 3 days | 37°C, 5% CO2 |
6 | Remove media | ||
7 | Freeze plates | >1 h | −80°C |
8 | Lysis buffer | 50 μL | 0.2 N HCl |
9 | Incubation time | Overnight | 4°C |
10 | Transfer lysate | 20 μL | |
11 | Neutralization buffer | 5 μL | |
12 | Incubation time | 1 h | Ambient temperature |
13 | Wash plates | 50 μL once, 100 μL twice | TBS-T |
14 | Blocking | 100 μL | SuperBlock blocking buffer |
15 | Incubation time | 1 h | Ambient temperature |
16 | Wash plates | 100 μL three times | TBS-T |
17 | Primary antibody | 25 μL | 1 μg/mL rabbit anti-H3K27me3 or 0.29 μg/mL rabbit anti-histone H3 |
18 | Wash plates | 100 μL three times | TBS-T |
19 | Secondary antibody | 25 μL | europium-N1-labeled anti-rabbit IgG antibody |
20 | Wash plates | 100 μL three times, 120 μL two times | TBS-T |
21 | Enhancement solution | 25 μL | |
22 | Incubation time | 30 min | Ambient temperature |
23 | Assay readout | 320 and 615 nm | EnVision plate reader, TRF mode |
Step Notes
1. 384-well clear-bottom Greiner Bio-One assay plate.
2,5. Plates were sealed with sterile breathable tape.
4. 100 μM to 15 nM dilution series.
6. Use aspiration.
9,12,15. Plates lidded.
10. Transfer cell lysates to two 384-well high-binding MaxiSorp plates.
17,19. Diluted in SuperBlock-T20.
22. Plates lidded until read.
23. Excitation with laser (320 nm), emission filter (615 nm).
HCl, hydrochloric acid; TBS-T, Tris-Buffered Saline Tween-20; TRF, time-resolved fluorescence technology.