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| Software | Institution | Year | Reference |
|---|---|---|---|
| Hicup | Babraham Bioinformatics | 2012 | 30 |
| HClib | Massachusetts Institute of Technology | 2012 | 31 |
| Homer | University California, San Diego | 2012 | 32 |
| HiCT | Institute Curie | 2012 | 33 |
