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Number of candidate sites, without removing cross-mapping probes, obtained using different cutoff parameters for Δβ and FDR.
| FDR | Δβ cutoff |
|||
|---|---|---|---|---|
| Cutoff | 0% | 10% | 12.5% | 15% |
| 1 | – | 1333 | 313 | 88 |
| 0.1 | 154 604 | 1328 | 312 | 87 |
| 0.05 | 102 343 | 1312 | 311 | 87 |
| 0.01 | 38 840 | 1175 | 286 | 82 |
