Table 1. Nucleotide Composition. Length L (2nd column), Hurst exponent H (3rd column), base composition (% of ATCG, 4th–7th columns) of the 24 chromosome whole sequences. Average nucleotide composition (% of the ATCG, 8th–11th columns) of the clusters, estimated according to the proposed method with n = 4 over the first 10MBases of the 24 chromosome sequences. In particular, the data in the 8th–11th columns correspond to the plots shown in the middle panels of Figs. 3,4,5,6,7,8 for each chromosome. In Tables S1–S6 of Supplementary Information, further results, estimated over different data sets with different values of n, are reported.
CHR | L | H | A [%] | C[%] | G[%] | T[%] | A[%] | C[%] | G[%] | T[%] |
---|---|---|---|---|---|---|---|---|---|---|
1 | 226217758 | 0.64 | 29.09 | 20.87 | 20.87 | 29.14 | 26.52 | 25.79 | 25.58 | 25.15 |
2 | 237900011 | 0.66 | 29.84 | 20.11 | 20.13 | 29.90 | 28.50 | 24.51 | 22.34 | 29.81 |
3 | 195304882 | 0.66 | 30.14 | 19.84 | 19.84 | 30.16 | 28.46 | 21.77 | 21.50 | 28.65 |
4 | 187941502 | 0.66 | 30.87 | 19.11 | 19.12 | 30.88 | 34.47 | 19.80 | 22.86 | 30.28 |
5 | 177847050 | 0.66 | 30.20 | 19.74 | 19.77 | 30.27 | 29.97 | 24.86 | 19.70 | 36.43 |
6 | 169100547 | 0.65 | 30.18 | 19.80 | 19.81 | 30.19 | 29.97 | 21.23 | 21.73 | 28.27 |
7 | 155403473 | 0.66 | 29.60 | 20.38 | 20.36 | 29.63 | 28.85 | 21.79 | 27.09 | 22.93 |
8 | 143332430 | 0.65 | 29.90 | 20.06 | 20.06 | 29.86 | 29.51 | 20.61 | 20.85 | 29.03 |
9 | 120994158 | 0.67 | 29.35 | 20.65 | 20.64 | 29.33 | 27.91 | 21.83 | 21.38 | 28.76 |
10 | 131739836 | 0.65 | 29.19 | 20.79 | 20.78 | 29.22 | 31.15 | 19.94 | 19.47 | 29.44 |
11 | 131247160 | 0.68 | 29.20 | 20.77 | 20.79 | 29.21 | 28.97 | 22.23 | 25.08 | 26.85 |
12 | 130304143 | 0.67 | 29.59 | 20.40 | 20.39 | 29.60 | 30.66 | 22.85 | 24.19 | 29.62 |
13 | 95747346 | 0.66 | 30.69 | 19.26 | 19.26 | 30.77 | 33.94 | 20.95 | 21.82 | 33.88 |
14 | 88290585 | 0.67 | 29.44 | 20.41 | 20.46 | 29.67 | 33.94 | 20.95 | 21.82 | 33.88 |
15 | 81927784 | 0.66 | 28.89 | 21.13 | 21.10 | 28.86 | 32.64 | 21.69 | 20.74 | 33.00 |
16 | 78990748 | 0.67 | 27.53 | 22.35 | 22.44 | 27.66 | 29.17 | 24.30 | 22.89 | 31.49 |
17 | 79620483 | 0.65 | 27.17 | 22.81 | 22.76 | 27.22 | 25.36 | 24.80 | 24.73 | 24.87 |
18 | 74660927 | 0.67 | 30.09 | 19.87 | 19.90 | 30.12 | 25.36 | 24.80 | 24.73 | 24.87 |
19 | 56038018 | 0.66 | 25.79 | 24.14 | 24.20 | 25.86 | 32.65 | 21.61 | 23.15 | 30.64 |
20 | 59505758 | 0.66 | 27.76 | 22.02 | 22.09 | 28.10 | 29.01 | 24.09 | 19.02 | 36.45 |
21 | 35452914 | 0.65 | 29.68 | 20.39 | 20.44 | 29.46 | 32.27 | 19.25 | 21.18 | 27.29 |
22 | 35059666 | 0.65 | 26.08 | 23.98 | 23.95 | 25.96 | 28.30 | 22.93 | 24.63 | 24.92 |
X | 152580014 | 0.65 | 30.20 | 19.73 | 19.76 | 30.26 | 32.88 | 20.86 | 25.39 | 28.01 |
Y | 25654723 | 0.72 | 29.88 | 19.87 | 20.08 | 30.14 | 27.45 | 22.05 | 24.21 | 26.49 |