Table 2.
Function | Enzyme | Substrate | Substrate concentration | Detection (nm) | Assay type |
---|---|---|---|---|---|
Cellulose degradation | Cellulase | AZCL-HE-Cellulose | 0.1% (w/v) | 590 | Liquid |
Cellobiohydrolase | 4-MUB-β-D-Cellobiose | 1 mM | 365/450 | Liquid | |
β-Glucosidase | PNP-β-D-Glucoside | 1 mM | 410 | Liquid | |
Hemicellulose degradation | Xylanase | AZCL-Xylan | 0.1% (w/v) | 590 | Liquid |
β-Xylosidase | 4-MUB-β-D-Xyloside | 365/450 | Liquid | ||
Starch degradation | α-Amylase | Starch Azure | 0.5% (w/v) | 590 | Liquid |
α-Glucosidase | 4-MUB-α-D-Glucoside | 1 mM | 365/450 | Liquid | |
Chitin degradation | Chitinase | Chitin azure | 0.1% (w/v) | 590 | Liquid |
N-AcetyL-β-D-glucosaminidase | 4-MUB-β-N-acetylglucosamine | 1 mM | 365/450 | Liquid | |
Lignin degradation | Polyphenol oxidase | L-dihydroxyphenylalanine | 5 mM | 480 | Liquid |
Laccase | Syringaldazine | 40 μM | 530 | Liquid | |
PO4 mineralization | Phosphatase | 5-Bromo-4-chloro-3-indolyl phosphate | 0.1 mM | Visual | Solid |
Protein turnover | Protease | Skim milk | 2% | Visual | Solid |
In order to allow simultaneous detection of multiple activities, azurin cross-linked (AZCL), p-nitrophenyl (PNP) and 4-methylumbelliferyl (MUB) labeled carbohydrates were pooled on the same assay plate per polymer type, e.g., AZCL Xylan and -MUB- β-D-Xyloside were pooled for screening for activities involved in hemicellulose degradation.