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. 2013 Sep 23;8(9):e74074. doi: 10.1371/journal.pone.0074074

Figure 2. ROC curves of CoCiter and GO enrichment analysis by Fisher exact test.

Figure 2

The analysis was based on 2097 gold standard positives (GSP) and 603 gold standard negatives (GSN) selected from the overlapping and non-overlapping GO and KEGG annotations, respectively (Supplemental Methods in File S1). The curve for CoCiter_Gene_Gene association function was obtained by using the KEGG genes and GO genes as input, while that for CoCiter_Gene_Term association function was obtained using the KEGG pathway keywords as terms and GO genes as input.