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. 2013 Sep 23;8(9):e74074. doi: 10.1371/journal.pone.0074074

Table 2. Performances of CoCiter, FatiGO, Martini and Marmite on the disease resistant and randomly selected dataset.

Tools Comparison Time P CI Description
CoCiter Disease resistance gene vs. Disease resistance term 4 sec <0.001 6.3576
Random genes vs. Disease resistance terms 7 sec 0.337 4.1699
Disease resistance genes vs. random genes 9 sec 0.979 10.3859
FatiGO Disease resistance gene vs. Disease resistance term background 4 min <0.001 defense response, immune response Unable to accept user defined terms
Random genes vs. Disease resistance term background 4 min NA Nothing enriched in these genes Unable to accept user defined terms
Disease resistance gene vs. randomly picked gene 2 min <0.001 response to stress, defense response, immune response
Martini Disease resistance gene vs. Disease resistance term NA NA NA too many entries to carry on
Random selected genes vs. Disease resistance terms NA NA NA too many entries to carry on
Disease resistance genes vs. random genes <30s <0.001 disease, resistance, avirulent, pathogen, plant diseases
Marmite Disease resistance gene vs. Disease resistance term NA NA NA Unable to accept user defined terms
Random gene vs. Disease resistance term NA NA NA Unable to accept user defined terms
Disease resistance gene vs. randomly picked gene <30 sec NA NA No entities found
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