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. 2013 Sep 23;8(9):e74442. doi: 10.1371/journal.pone.0074442

Table 3. Frequencies of HLA-DRB1-DQB1 blocks in 234 Mexican admixed individuals (468 haplotypes).

DRB1-DQB1 block n H.F. Δ′ t DRB1-DQB1 block n H.F. Δ′ t
Amerindian DRB1*08∶02 DQB1*04∶02 89 0.1902 0.9723 12.33 African DRB1*10∶01 DQB1*05∶01 5 0.0107 0.8211 2.24
DRB1*04∶07 DQB1*03∶02 54 0.1153 0.9518 8.51 DRB1*13∶01 DQB1*03∶03 4 0.0086 0.3942 1.96
DRB1*14∶06 DQB1*03∶01 46 0.0983 0.9717 7.88 DRB1*08∶04 DQB1*03∶01 2 0.0043 1.0000 1.55
DRB1*16∶02 DQB1*03∶01 30 0.0641 1.0000 6.25 DRB1*03∶02 DQB1*04∶02 1 0.0022 1.0000 1.05
DRB1*14∶02 DQB1*03∶01 11 0.0235 1.0000 3.68 DRB1*12∶01 DQB1*05∶01 1 0.0022 0.4632 0.93
DRB1*04∶11 DQB1*03∶02 8 0.0171 0.8526 2.93 DRB1*13∶01 DQB1*05∶01 1 0.0022 0.0159 0.18
DRB1*04∶10 DQB1*04∶02 1 0.0022 0.3706 0.71 DRB1*13∶04 DQB1*03∶01 1 0.0022 1.0000 1.10
DRB1*04∶11 DQB1*04∶02 1 0.0022 −0.4595 −0.70 DRB1*15∶03 DQB1*06∶02 1 0.0022 1.0000 1.00
Total 240 0.5129 Total 16 0.0346
Caucasian DRB1*03∶01 DQB1*02∶01 15 0.0320 1.0000 4.02 Asian DRB1*11∶02 DQB1*03∶01 3 0.0064 0.6674 1.60
DRB1*15∶01 DQB1*06∶02 15 0.0320 0.8779 4.01 DRB1*04∶04 DQB1*04∶02 2 0.0043 −0.6862 −2.03
DRB1*04∶02 DQB1*03∶02 10 0.0214 1.0000 3.50 DRB1*09∶01 DQB1*03∶03 1 0.0022 1.0000 1.00
DRB1*11∶04 DQB1*03∶01 8 0.0171 1.0000 3.13 DRB1*12∶01 DQB1*03∶01 1 0.0022 0.3348 0.63
DRB1*13∶01 DQB1*06∶03 6 0.0128 1.0000 2.49 DRB1*13∶01 DQB1*06∶02 1 0.0022 0.0487 0.59
DRB1*07∶01 DQB1*03∶03 5 0.0107 0.4620 2.10 DRB1*13∶02 DQB1*05∶01 1 0.0022 0.0338 0.33
DRB1*04∶01 DQB1*03∶02 3 0.0064 1.0000 1.90 DRB1*15∶01 DQB1*05∶01 1 0.0022 −0.1415 −0.16
DRB1*11∶01 DQB1*03∶01 2 0.0043 0.1130 0.40
DRB1*04∶07 DQB1*03∶01 1 0.0022 −0.9268 −3.80 Total 10 0.0217
DRB1*08∶03 DQB1*03∶01 1 0.0022 1.0000 −0.60
Total 66 0.1411
Caucasian shared with other populations DRB1*04∶04 DQB1*03∶02 29 0.0620 0.9144 5.92 DRB1*04∶07 DQB1*06∶04 1 0.0022 −0.1509 −0.17
DRB1*07∶01 DQB1*02∶02 28 0.0598 1.0000 5.66 DRB1*10∶01 DQB1*05∶02 1 0.0022 0.3247 0.98
DRB1*01∶02 DQB1*05∶01 11 0.0235 1.0000 3.41 DRB1*11∶02 DQB1*03∶19 1 0.0022 0.2419 0.98
DRB1*04∶03 DQB1*03∶02 10 0.0214 1.0000 3.50 DRB1*14∶06 DQB1*04∶02 1 0.0022 −0.8965 −3.37
DRB1*01∶01 DQB1*05∶01 9 0.0192 1.0000 3.07 DRB1*16∶01 DQB1*05:New 1 0.0022 1.0000 1.00
DRB1*13∶02 DQB1*06∶04 9 0.0192 0.8978 3.07 Total 7 0.0153
DRB1*14∶01 DQB1*05∶03 8 0.0171 1.0000 2.89
DRB1*15∶02 DQB1*06∶01 5 0.0107 1.0000 2.27
DRB1*11∶01 DQB1*03∶19 4 0.0086 0.7974 2.02
DRB1*01∶03 DQB1*05∶01 3 0.0064 1.0000 1.75
DRB1*12∶02 DQB1*03∶01 3 0.0064 1.0000 1.90
DRB1*13∶03 DQB1*03∶01 3 0.0064 1.0000 1.90
DRB1*04∶05 DQB1*03∶02 1 0.0022 1.0000 1.09
DRB1*04∶08 DQB1*03∶01 1 0.0022 1.0000 1.10
DRB1*04∶10 DQB1*03∶02 1 0.0022 0.3366 0.63
DRB1*08∶01 DQB1*04∶02 1 0.0022 1.0000 1.05
DRB1*13∶05 DQB1*03∶01 1 0.0022 1.0000 1.10
DRB1*15∶01 DQB1*05∶02 1 0.0022 0.3081 0.93
DRB1*16∶01 DQB1*05∶02 1 0.0022 0.4968 1.00
Total 129 0.2761

Blocks of each ancestry (Amerindian, Caucasian, Caucasian shared with other populations, African and Asian) were defined as those found in original populations with H.F. >1,0%, and not found in other native human groups in frequencies higher than 1,0%. We consider t value must be ≥2.0 to denote statistically significant association and thus validate Δ′ (shaded values). Similar to DQB1*05∶02 with a silent mutation at codon 133 cgg>cga.