Table 2.
Summary of stripe rust regions on group 2 chromosomes associated with stripe rust resistance QTLs
Chromosome region | Source | Markers | Field | Infection type | References | ||||
---|---|---|---|---|---|---|---|---|---|
LOD | PEV | Freq | LOD | PEV | Freq | ||||
QRYr2A.1 | Y16DH70 | Xgwm636 | 14–19 | 37–49 | 2/2 | 9–16 | 31–53 | 2/2b | Agenbag et al. (2012) |
QRYr2A.1 | Pioneer26R61 |
Xbarc124 Xgwm359 |
15–25 | 23–24 | 3/3 | Hao et al. (2011) | |||
QRYr2A.1 | Recital | Xcfd36 | 5.0–6.8 | 5.5–7.7 | 2/4 | Dedryver et al. (2009) | |||
QRYr2A.1 | Camp Remy |
Xgwm356 Xgwm122, Xgpw2111 |
5.4–6.1 | 20–40 | 4/4 | Mallard et al. (2005) | |||
QRYr2A.1 | Stephens |
wPt-0003 (Xgwm359) |
3.8–6.7 | 9–20 | 4/6 | Vazquez et al. (2012) | |||
QRYr2A.1 | Kukri | Xbarc5 | 3.7–4.1 | 13–15 | 2/6 | Bariana et al. (2010) | |||
QRYr2A.1 | T. monococcum |
Xwmc170 (Xbarc5) |
7.8–15 | 7–12 | 3/3 | 13–15 | 11–13 | 3/3b | Chhuneja et al. (2008) |
QRYr2A.2 | Recital |
Xgwm382 Xbarc122 |
4.4–5.4 | 4.5–8.1 | 2/4 | Dedryver et al. (2009) | |||
QRYr2A.2 | Camp Remy |
Xgwm359 Xgwm382 |
1.7 | 10.7 | 2/2 | 3 | 15 | 2/2b | Boukhatem et al. (2002) |
QRYr2B.1 | Renan |
Xgwm210a Xfbb67c |
12–13 | 9–16 | 4/4 | Dedryver et al. (2009) | |||
QRYr2B.1 | Stephens | wPt-5738 | 3–3.6 | 10 | 2/6 | Vazquez et al. (2012) | |||
QRYr2B.2 | Attila |
Xwmc257 Xwmc154 |
4.7–9.3 | 3/3 | Rosewarne et al. (2008) | ||||
QRYr2B.2 | Luke |
Xwmc154 Xgwm148 |
5.1–7.7 | 32–37 | 3/3b | Guo et al. (2008) | |||
QRYr2B.2 | Opata 85 | Xcdo405, Xbcd152 | 7.4 | 30.7 | 2/2b | Boukhatem et al. (2002) | |||
QRYr2B.2 | Chapio |
wPt-0079 (wPt-8583, Xgwm410) |
3.3–7.8 | 4.9–13.6 | 3/8 | Yang et al. (2013) | |||
QRYr2B.2 | Luke |
Xgwm148 Xbarc167 |
5.5–8.8 | 33–42 | 3/3b | Guo et al. (2008) | |||
QRYr2B.2 | Kareiga | Xgwm148 | 55a | 30 | 1/1 | 95a | 46 | 1/1b | Ramburan et al. (2004) |
QRYr2B.2 | Stephens | wPt-0408 | 2.8–4.3 | 8–13 | 5/6 | Vazquez et al. (2012) | |||
QRYr2B.3 | Pingyuan 50 |
Xbarc13 Xbarc55 |
1.7–3.2 | 5.1–9.5 | ¾ | Lan et al. (2010) | |||
QRYr2B.3 | Louise |
Xwmc474 Xbarc230 |
5.5–30 | 11–58 | 7/8 | Carter et al. (2009) | |||
QRYr2B.3 | Camp Remy |
Xgwm47 Xgwm501 |
11.8 | 46 | 2/2 | 12 | 46 | 2/2b | Boukhatem et al. (2002) |
QRYr2B.3 | Naxos | wPt-8460 | 4.9 | 12.2 | 1/3 | Ren et al. (2012a) | |||
QRYr2B.3 | Pastor |
Yr31 (Lr23, Lr13) |
10–17 | 32–66 | ¾ | Rosewarne et al. (2012) | |||
QRYr2B.4 | Cranbrook |
Xwmc339 Yr7 |
Bariana et al. (2001) | ||||||
QRYr2B.4 | Camp Remy |
Xbarc101 Xgwm120, Xwmc175 |
22–36 | 42–61 | 4/4 | Mallard et al. (2005) | |||
QRYr2B.4 | Aquileja |
Xwmc175 Xwmc332 |
7.8–13.9 | 49–62 | 3/3b,c | Guo et al. (2008) | |||
QRYr2B.4 | Avocet | Xgwm619 | 3.6 | 6.3 | 1/3 | Rosewarne et al. (2008) | |||
QRYr2D.1 | Libellula |
Xcfd51 Xgwm261 |
5–10 | 8–10 | 2/4 | Lu et al. (2009) | |||
QRYr2D.2 | Camp Remy |
Xgwm102 Xgwm539 |
5.7–11 | 24–69 | 4/4 | Mallard et al. (2005) | |||
QRYr2D.2 | Yr16DH70 | Xgwm102 | 5.4 | 8.4 | 1/2 | 6.1–6.6 | 10 | 2/2b | Agenbag et al. (2012) |
QRYr2D.2 | Sunco |
Xgdm005 Xwmc190 |
15.8a | 1/1 | Bariana et al. (2001) | ||||
QRYr2D.2 | Guardian |
Xgwm539 Xgwm349 |
4.4 | 11 | ½ | 4.3 | 14 | ½b | Melichar et al. (2008) |
QRYr2D.2 | Naxos |
Xgwm539 Xcfd62 |
5.6 | 10.2 | 1/3 | Ren et al. (2012a) | |||
QRYr2D.2 | Fukuho-komugi | Xgwm349 | 14.5a | 9.6 | 1/3 | Suenaga et al. (2003) | |||
QRYr2D.3 | Alcedo |
Xgwm320 Xgwm301 |
14–18 | 32–36 | 2/2 | 18–28 | 36–53 | 2/2b | Jagger et al. (2011) |
Markers in parentheses were not described in the original publication but were used as closely associated substitutes on consensus maps where the original markers were not available. Frequency (Freq) describes to number of environments that the locus had a significant QTL, out of the total number of environments tested
aLikelihood ratio reported
bInfection type scored in field on adult plants
cStripe number per 10 cm2 leaf area