Figure - PMC

Skip to main content

An official website of the United States government

Here's how you know

Here's how you know

Official websites use .gov
A .gov website belongs to an official government organization in the United States.

Secure .gov websites use HTTPS
A lock ( ) or https:// means you've safely connected to the .gov website. Share sensitive information only on official, secure websites.

View full-text article in PMC

. 2013 Jul 22;41(17):e162. doi: 10.1093/nar/gkt628

Search in PMC
Search in PubMed
View in NLM Catalog
Add to search

© The Author(s) 2013. Published by Oxford University Press.

This is an Open Access article distributed under the terms of the Creative Commons Attribution License (http://creativecommons.org/licenses/by/3.0/), which permits unrestricted reuse, distribution, and reproduction in any medium, provided the original work is properly cited.

PMC Copyright notice

Figure 7. — Results for the duplication method simulation of MSAs with GALA-LRR-like repeats. The vertical facets represent sequence divergence (i.e. total tree lengths measured in expected substitutions per site) used in simulation. ProGraphMSA was executed without any additional information on TRs, whereas ProGraphMSA+TR used TR information detected by TRUST, and ProGraphMSA+realTR was executed with the true TR-MSA provided (as known from simulation). Results for the popular programs MAFFT and MUSCLE are depicted for a qualitative comparison.