Table 1. Comparison of the expression patterns of miRNAs in P . pedatisecta and P . ternata leaves.
miRNA family | miRNA Name | Sequence (5' to 3') | P . ternata Signal-A | P . pedatisecta Signal-B | Log2 Ratio (B/A) | Predicted function of miRNAs |
---|---|---|---|---|---|---|
miR156 | ghr-miR156c | UGUCAGAAGAGAGUGAGCAC | 101 | 1,192 | 3.56 | Squamosa promoter-binding protein |
osa-miR156l | CGACAGAAGAGAGUGAGCAUA | 202 | 1,594 | 2.98 | ||
vvi-miR156e | UGACAGAGGAGAGUGAGCAC | 89 | 632 | 2.83 | ||
sbi-miR156e | UGACAGAAGAGAGCGAGCAC | 298 | 2,105 | 2.82 | ||
bna-miR156a | UGACAGAAGAGAGUGAGCACA | 468 | 3,200 | 2.77 | ||
aly-miR156g | CGACAGAAGAGAGUGAGCAC | 538 | 3,295 | 2.61 | ||
aly-miR156a | UGACAGAAGAGAGUGAGCAC | 557 | 3,401 | 2.61 | ||
miR159 | ptc-miR159f | AUUGGAGUGAAGGGAGCUCGA | 7,570 | 3,150 | -1.27 | MYB transcription factors |
pta-miR159b | UUGGAUUGAAGAGAGCUCCC | 3,465 | 1,265 | -1.45 | ||
zma-miR159e | AUUGGUUUGAAGGGAGCUCCA | 3,250 | 1,166 | -1.48 | ||
miR165 | aly-miR165a | UCGGACCAGGCUUCAUCCCC | 714 | 327 | -1.13 | |
miR166 | aly-miR166a-5p | GGAAUGUUGUCUGGCUCGAGG | 64 | 722 | 3.49 | |
miR168 | aly-miR168a-3p | CCCGCCUUGCAUCAACUGAAU | 94 | 974 | 3.38 | Polyadenylate-binding protein |
hvu-miR168-5p | UCGCUUGGUGCAGAUCGGGAC | 427 | 1,027 | 1.27 | ||
miR396 | gma-miR396e | UUCCACAGCUUUCUUGAACUGU | 2,078 | 731 | -1.51 | Growth regulating factor |
miR397 | ptc-miR397b | CCAUUGAGUGCAGCGUUGAUG | 87 | 2,301 | 4.72 | Laccase |
miR528 | osa-miR528 | UGGAAGGGGCAUGCAGAGGAG | 1,099 | 7,565 | 2.78 | |
miR535 | aqc-miR535 | UGACAACGAGAGAGAGCACGCG | 9,629 | 19,234 | 1.00 | |
miR894 | ppt-miR894 | CGUUUCACGUCGGGUUCACC | 4,403 | 2,105 | -1.06 | |
miR1450 | ptc-miR1450 | UUCAAUGGCUCGGUCAGGUUAC | 421 | 8,285 | 4.30 | |
miR2919 | osa-miR2919 | AAGGGGGGGGGGGGAAAGA | 1,924 | 369 | -2.38 |