TABLE 3.
In vivo λ N-mediated antitermination assays
The ratios of β-galactosidase activities in the presence (+ter) and absence (−ter) of terminators give the values of terminator read-through (%RT), which is a measure of antitermination efficiency. %RT is defined as the same way as in Table 2. Rho-dependent (Plac-l tR1-trpt′-lacZYA; columns 1 and 2) and -independent (Plac-l nutR-TR′-T1-T2-lacZYA; columns 3 and 4) terminator cassettes were fused to the lacZ reporter for the assays. The Rho-dependent terminator, tR1 was derived from the nutR-cro region of phage λ. Measurements were performed both in the absence (−λ N) and presence (+λ Ν) of λ N proteins. ND, not determined.
| nusA allels | 1 +λ N β- Galactosidase activity |
2 −λ N β- Galactosidase activity |
3 +λ N β- Galactosidase activity |
4 −λ N β- Galactosidase activity |
||||||||
|---|---|---|---|---|---|---|---|---|---|---|---|---|
| +tR1-trpt′ | −tR1-trpt′ | %RT | +tR1-trpt′ | −tR1-trpt′ | %RT | +TR′-T1-T2 | −TR′-T1-T2 | %RT | +TR′-T1-T2 | −TR′-T1-T2 | %RT | |
| Arbitrary units | Arbitrary units | Arbitrary units | Arbitrary units | |||||||||
| WT | 475 ± 14 | 944 ± 6 | 50.3 | ND | ND | ND | 425 ± 4 | 891 ± 86 | 47.7 | 6.0 ± 1.0 | 240 ± 9 | 2.5 |
| ΔAR2 | 485 ± 30 | 937 ± 36 | 51.8 | ND | ND | ND | 434 ± 10 | 754 ± 50 | 57.5 | 8.0 ± 1.1 | 379 ± 19 | 2.1 |
| ΔAR1–2 | 442 ± 37 | 824 ± 34 | 53.6 | ND | ND | ND | 347 ± 16 | 890 ± 78 | 38.9 | 10.0 ± 1.2 | 379 ± 18 | 2.6 |