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. Author manuscript; available in PMC: 2014 Oct 1.
Published in final edited form as: Alcohol Clin Exp Res. 2013 Jun 25;37(10):1657–1667. doi: 10.1111/acer.12139

Table 1.

Methylation-specific PCR primer sequence

Primer set Forward primer, 5′→3′ CpG di-nucleotides Reverse primer, 5′→3′ CpG di-nucleotides
MSP-9-1-M CGT TTT TTT GAG GTT TCG TC 3 GTA ATC TCG AAT CGC TCG AC 2
MSP-9-1-U TTT TGT TTT TTT GAG GTT TTG TT TCC ATA ATC TCA AAT CAC TCA AC
MSP-9-2-M GCG TTA AGG AGG TAA AAG GTC 2 TAA CGA CGA CGA CAA CAA C 3
MSP-9-2-U TTA GTG TTA AGG AGG TAA AAG GTT TAA CAA CAA CAA CAA CAA CAA C
MSP-9-3-M TAT TCG TCG GTA TCG TTG TC 4 CTC TAA CTC TCC GCG TAC G 3
MSP-9-3-U TTT TAT TTG TTG GTA TTG TTG TT CCC CTC TAA CTC TCC ACA TAC A