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. Author manuscript; available in PMC: 2013 Sep 30.
Published in final edited form as: Pediatr Res. 2012 Jan;71(1):4–12. doi: 10.1038/pr.2011.4

Table 6.

Bacterial-specific primers

Group Reference strain Primers Product length (bp)
Bac 338 Escherichia coli UniF340-ACTCCTACGGGAGGCAGCAGT 175
Eubacteria UniR514-ATTACCGCGGCTGCTGGC
Bac303 Bacteroides fragilis BactF285-GGTTCTGAGAGGAGGTCCC 75
Bacteroides DSM 2151 UniversalR338-GCTGCCTCCCGTAGGAGT
Erec Ruminococcus productus UniversalF338-ACTCCTACGGGAGGCAGC 139
Eubacterium rectale/Clostridium coccoides DSM 2950 CcocR491-GCTTCTTAGTCAGGTACCGTCAT
Labnew Lactobaccillus acidophilus LABF362-AGCAGTAGGGAATCTTCCA 315
Lactobacillus/Enterococcus NIZO B228 LABR677-CACCGCTACACATGGAG

16S rDNA group-specific and kingdom-specific primers for quantitative PCR (26,27).