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. 2013 Sep 30;8(9):e75850. doi: 10.1371/journal.pone.0075850

Table 1. Nucleotide sequences of the primers and probes used in this study.

PCR type Gene name Primer/Probe name Sequence(5’–3’) Amplicon size
Sequence PCR Acc1 Seq-Acc1-F TGCATCTGCGCTGTTTGT 184bp
Seq-Acc1-R AATGACTGAACACGACGACT
ALMT1 Seq-ALMT1-F CCAAGGTGCTTAGGGATC 171bp
Seq-ALMT1-R CAAGAAGTGTTGCGGTGA
Waxy-D1 Seq-Waxy-F CTATTGGTTCTCCGTGTTTG 263bp
Seq-Waxy-R GTCATCTGTCATTTCCTGGTT
PKABA1 Seq–PKABA1-F AGGGAGATTTAGCGAGGAT 211bp
Seq-PKABA1-R TGTGCCGACAGTTGACTT
Real-time PCR Acc1 Q-Acc1-F TGCCCATTGTCGGCCTTA 93bp
Q-Acc1-R GGGCAGATGGTTGGAATGC
Q-Acc1-p FAM-TGCCTCGACAACACCATCGCTATCC-TAMRA
Q-Acc1-F2 TGCCCATCGTCGGCCTTA
ALMT1 Q-ALMT1-F AATGACTGTGCCGTCTCCAGT 95bp
Q-ALMT1-R ACAGAGCCGTGTTCTCTGCA
Q-ALMT1-p VIC-CGTGAAAGCAGCGGAAAGCCTCAGA-TAMRA
Q-ALMT1-F2 ACTGACTGTGCCGTCTCCAGT
Q-ALMT1-p2 VIC-CGTAAAAGCAGCGGAAAGCCTCAGA-TAMR
Waxy-D1 Q-Waxy-F GTCGCGGGAACAGAGGTGT 87bp
Q-Waxy-R GGTGTTCCTCCATTGCGAAA
Q-Waxy-p FAM-CAAGGCGGCCGAAATAAGTTGCC-TAMRA
PKABA1 Q-PKABA1-F CAAGTATGTCATAGAGATTTGAA 87bp
Q-PKABA1-R GTAACCGAAGTCACAAATCT
Q-PKABA1-P FAM-TCGCACCTCGGCT-MGBNFQ
Q-PKABA1-p2 FAM-TCGCACCTCGACT-MGBNFQ