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. 2013 Sep 30;8(9):e74383. doi: 10.1371/journal.pone.0074383

Table 1. Partial RMSDs for the MD-NMR simulation.

Segment Definition RMSD(Å)
H1 11–18 7.3
H2 24–34 3.5
H3 45–54 2.8
H4 62–72 2.6
H5 82–93 1.6
H6 98–108 1.8
H7 118–132 1.3
H8 146–155 5.0
H9 166–174 5.0
β1 42–44 1.9
β2 58–60 3.1
β3 79–81 1.8
β4 115–117 2.0
β5 136–138 11.6
β6 163–165 3.3
L1 56–61 3.7
L2 133–145 10.2
L3 175–187 8.3

Partial RMSD evaluated after structure alignment over the backbone atoms of protein core residues. RMSD values for the helices H1 to H9, the Inline graphic-strands Inline graphic to Inline graphic, and the loops L1, L2, and L3 between the most representative structure of the MD-NMR trajectory and the corresponding initial structure. Inline graphic and Inline graphic are sub-structures of the L1 and L2 segments respectively.