Table 1.
Comparison of select SNPs in cases (N=1459) versus Australian Twin Registry controls (N=1495) and neighborhood controls (N=531) using additive models (additive models - p values are shown)
Gene | SNP | SNP Location* | Minor allele |
P Value
|
|
---|---|---|---|---|---|
Heroin-dependent cases vs ATR controls1 | Heroin-dependent cases vs neighborhood controls | ||||
NCAM1 | rs4492854 | 112488744 | G | .18 | .0073 |
NCAM1 | rs11214546 | 112611738 | A | .054 | .31 |
NCAM1 | rs587761 | 112615990 | A | .55 | .0046 |
NCAM1 | rs2186798 | 112633271 | C | .045 | .056 |
| |||||
TTC12 | rs2303380 | 112705919 | G | .19 | .0046 |
TTC12 | rs10891536 | 112714638 | G | .027 | .010 |
TTC12 | rs4938009 | 112736138 | A | .029 | .0046 |
TTC12 | rs719804 | 112739985 | G | .085 | .14 |
TTC12 | rs7130431 | 112743433 | A | .12 | .00018 |
TTC12 | rs12804573 | 112746936 | G | .040 | .0014 |
| |||||
ANKK1 | rs877137 | 112761540 | A | .12 | .00083 |
ANKK1 | rs877138 | 112761718 | G | .037 | .00029 |
ANKK1 | rs12360992 | 112768110 | C | .25 | .0014 |
ANKK1 | rs4938013 | 112769680 | A | .069 | .00030 |
ANKK1 | rs2734849 | 112775370 | G | .30 | .0024 |
ANKK1 | rs2734848 | 112775584 | G | .016 | .0081 |
ANKK1 | rs1800497 | 112776038 | T | .93 | .12 |
| |||||
DRD2 | rs2234689 | 112783693 | G | .029 | .0066 |
DRD2 | rs1554929 | 112783974 | A | .34 | .0010 |
DRD2 | rs2440390 | 112792088 | A | .17 | .0091 |
DRD2 | rs1076563 | 112801119 | A | .11 | .0034 |
DRD2 | rs7125415 | 112815891 | A | .011 | .22 |
Abbreviations: ATR, Australian Twin Registry; SNP, single-nucleotide polymorphism
From NCBI build 37.2 (National Center for Biotechnology Information).
Four principal components (PCs) were included in model for admixture correction.