Table 1. Protein identifications in A. suum L3-egg ES products.
Category/Protein identitya | IDb | Score | Coverage | Unique sequences | emPAI | Sigc |
% | ||||||
Metabolic pathway | ||||||
Endochitinase | GS_04985 | 205 | 13 | 2 | 0.24 | ++ |
GS_08584/GS_15811d | 146 | 18/10 | 1 | 0.57 | ++ | |
Motor activity | ||||||
Myosin-4 | GS_03209 | 54 | 1 | 1 | 0.02 | − |
Paramyosin | GS_12985 | 122 | 3 | 3 | 0.1 | − |
Tropomyosin | GS_20722 | 97 | 6 | 1 | 0.12 | − |
Binding | ||||||
14-3-3-like protein | GS_05590 | 174 | 14 | 4 | 0.51 | − |
32 kDa beta-galactoside-binding lectin lec-3 | GS_06140 | 96 | 5 | 1 | 0.10 | + |
Globin-like protein | GS_08818 | 73 | 12 | 2 | 0.21 | − |
Histone H2A* | GS_13585 | 99 | 23 | 2 | 0.67 | ++ |
GS_19480 | 141 | 25 | 2 | 0.67 | ++ | |
Histone H2B.1/H2B.2 | GS_12983 | 55 | 19 | 2 | 0.67 | ++ |
Histone H4 | GS_02440 | 166 | 40 | 4 | 2.3 | − |
Nucleoside diphosphate kinase | GS_12864 | 98 | 6 | 1 | 0.33 | − |
Other | ||||||
Serpin-like protein | GS_15000 | 49 | 19 | 3 | 0.27 | − |
GS_19115 | 50 | 7 | 2 | 0.09 | − | |
GS_19745 | 77 | 4 | 1 | 0.11 | − | |
Unknown | ||||||
PAN domain-containing protein | GS_06520 | 265 | 12 | 4 | 0.27 | + |
Hypothetical protein CBG_20511 | GS_15101 | 79 | 11 | 2 | 0.08 | ++ |
Unknown | GS_06759 | 125 | 8 | 3 | 0.17 | ++ |
Unknown | GS_19262 | 77 | 1 | 1 | 0.03 | − |
The proteins identified were categorized by their molecular function according to information obtained from the Gene Ontology database.
The accession number in A. suum genome database (available on WormBase, www.wormbase.org).
The identified proteins were predicted to be either a classical secretory protein (+), non-classical secretory protein (++) or not secreted (−) by secretion prediction using SignalP and SecretomeP.