Table 1. Variants detected by whole genome re-sequencing of an affected Labrador Retriever.
Filtering step | Number of variants |
Variants in the whole genomea | 2,980,294 |
Variants in the critical 1.6 Mb interval on CFA 2 | 1,533 |
Non-synonymous variants in the whole genomea | 7,911 |
Non-synonymous variants in the critical 1.6 Mb interval on CFA 2 | 4 |
The sequences were compared to the reference genome (CanFam 3.1) from a Boxer. Only variants that were homozygous in the affected Labrador Retriever are reported.