Fig. 4.

Cellular network of proteins co-expressed with ATP5B or FN1. A, ATP5B-related subnetwork in humans and other species. Panels show Western blot data for ATP5B in soft tissue. β-actin was used as a loading control, and three repeated samples were loaded onto the same acrylamide gel. B, FN1-related subnetwork in other species. Panels show immunohistochemical data for FN1 in soft tissue. These connections were based on the co-expression patterns shown in supplemental Fig. S1. Gray figures indicate targets identified in this study; white figures indicate stimulatory complexes/molecules. “No” indicates no tooth extraction. No-3 h, adjacent non-tooth extraction region at 3 h post-extraction; 1w and 2w, 1 week and 2 weeks after tooth extraction, respectively; H&E, hematoxylin and eosin stain; CD3, T cell receptor (TCR); UBC, polyubiquitin C; ATPAF1, ATP synthase mitochondrial F1 complex assembly factor 1; APP, amyloid precursor protein; MAPK3, mitogen-activated protein kinase 3; HTT, huntingtin; Tgf beta, transforming growth factor beta.