Abstract
In the title compound, C15H19NO4, all three carbonyl groups are syn-oriented with respect to the methine group attached to the phenyl ring. The mean planes of the phenyl ring and ethyl carbamate moiety form a dihedral angle of 65.2 (1)°. In the crystal, molecules related by translation in [100] are linked into chains via N—H⋯O hydrogen bonds.
Related literature
For details of the synthesis, see: Kuzmina et al. (2013 ▶). For the crystal structures of related compounds, see: Hatano et al. (2008 ▶).
Experimental
Crystal data
C15H19NO4
M r = 277.31
Triclinic,
a = 5.392 (2) Å
b = 9.204 (2) Å
c = 15.841 (6) Å
α = 81.58 (2)°
β = 81.98 (2)°
γ = 89.13 (3)°
V = 770.1 (4) Å3
Z = 2
Cu Kα radiation
μ = 0.71 mm−1
T = 295 K
0.50 × 0.21 × 0.10 mm
Data collection
Enraf–Nonius CAD-4 diffractometer
Absorption correction: ψ scan (North et al., 1968 ▶) T min = 0.76, T max = 0.92
4976 measured reflections
3176 independent reflections
2057 reflections with I > 2σ(I)
R int = 0.022
2 standard reflections every 150 reflections intensity decay: 3%
Refinement
R[F 2 > 2σ(F 2)] = 0.068
wR(F 2) = 0.231
S = 1.04
3176 reflections
189 parameters
15 restraints
H atoms treated by a mixture of independent and constrained refinement
Δρmax = 0.30 e Å−3
Δρmin = −0.19 e Å−3
Data collection: CAD-4 EXPRESS (Enraf–Nonius, 1994 ▶); cell refinement: CAD-4 EXPRESS; data reduction: XCAD4 (Harms & Wocadlo, 1995 ▶); program(s) used to solve structure: SHELXS97 (Sheldrick, 2008 ▶); program(s) used to refine structure: SHELXL97 (Sheldrick, 2008 ▶); molecular graphics: PLATON (Spek, 2009 ▶) and Mercury (Macrae et al., 2006 ▶); software used to prepare material for publication: SHELXL97.
Supplementary Material
Crystal structure: contains datablock(s) I, 1R. DOI: 10.1107/S1600536813024884/rk2414sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813024884/rk2414Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536813024884/rk2414Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report
Table 1. Hydrogen-bond geometry (Å, °).
D—H⋯A | D—H | H⋯A | D⋯A | D—H⋯A |
---|---|---|---|---|
N1—H1⋯O2i | 0.97 (3) | 2.26 (3) | 3.180 (4) | 158 (2) |
Symmetry code: (i) .
supplementary crystallographic information
1. Comment
Recently, we have developed a simple general five-step approach for the synthesis of macrocycles containing semicarbazide moieties via heterocyclization of semicarbazides with oxo group in 3 position (Kuzmina et al., 2013). The title compound, I, has been obtained as an intermediate product. Herewith we present its molecular and crystal structure.
In I (Fig. 1), all bond lengths and angles are normal and correspond well to those observed in the related (1R,2R)-benzyl (3-oxo-2-((2-oxo-1,3-oxazolidin-3-yl)carbonyl)-1-phenylbutyl)carbamate and (S)-benzyl (2-acetyl-1-(4-bromophenyl)-2-hydroxy-3-oxobutyl)carbamate (Hatano et al., 2008). In the molecule, all three carbonyl groups are syn oriented with respect to the methine group attached to the phenyl ring.
In the crystal, the molecules related by translation in [1 0 0] are linked into chains via intermolecular classical N–H···O hydrogen bonds (Table 1, Fig. 2).
2. Experimental
To a solution of KOH (0.277 g, 0.0049 mol) in 30 ml ethanol was added acetylacetone (0.495 g, 0.0049 mol) and stirred vigorously for 10 minutes. Ethyl N-[(tosyl)(phenyl)methyl]carbamate (1.5 g, 0.0045 mol) was added and reaction mixture stirred for 6.5 h. After completion of reaction, solution was evaporated to dryness and residue washed with saturated solution of NaHCO3, hexane and dried to give 1.1 g (88%) of ethyl N-[(2-acetyl-3-oxo-1-phenyl)butyl]carbamate as white powder. An analytically pure sample was obtained by recrystallization from MeOH-H2O (2:3). M.p. 421-422 K (MeOH-H2O (2:3)).
1H NMR (600 MHz; DMSO-d6): δH, p.p.m. 7.76(1H, d, J = 9.16 Hz, NH), 7.21-7.30 (5H, m, H in Ph), 5.15 (1H, t, J = 9.78 Hz, CH), 4.47(1H, d, J = 11.12 Hz, CH), 3.87-3.93 (2H, m, CH2 in COOEt), 2.22 (3H, s, CH3 in acetyl), 1.87 (3H, s, CH3 in acetyl), 1.08 (3H, t, J = 7.04 Hz, CH3 in COOEt). 13C NMR (150 MHz; DMSO-d6): δH, p.p.m. 14.4, 30.1, 30.7, 54.1, 59.9, 71.7, 127.3, 127.5, 128.4, 140.6, 155.3, 201.3, 201.5 Anal. Calcd for C15H19NO4: C, 64.97; H, 6.91; N 5.05. Found: C, 65.09; H, 6.98; N, 5.12.
3. Refinement
Atom H1 was located on a difference map and isotropically refined. C-bound H atoms were positioned geometrically (C–H = 0.93Å-0.98Å) and refined as riding, with Uiso(H) = 1.2-1.5Ueq(C).
Figures
Fig. 1.
Molecular structure of I whith the atom numbering scheme. Displacement ellipsoids are drawn at 50% probability level. H atoms are presented as a small spheres of arbitrary radius.
Fig. 2.
Portion of the crystal packing in I. Dotted blue lines denote hydrogen bonds.
Crystal data
C15H19NO4 | F(000) = 296 |
Mr = 277.31 | Dx = 1.196 Mg m−3 |
Triclinic, P1 | Melting point = 421–422 K |
a = 5.392 (2) Å | Cu Kα radiation, λ = 1.54184 Å |
b = 9.204 (2) Å | Cell parameters from 25 reflections |
c = 15.841 (6) Å | θ = 31.6–34.9° |
α = 81.58 (2)° | µ = 0.71 mm−1 |
β = 81.98 (2)° | T = 295 K |
γ = 89.13 (3)° | Prism, colourless |
V = 770.1 (4) Å3 | 0.50 × 0.21 × 0.10 mm |
Z = 2 |
Data collection
Enraf–Nonius CAD-4 diffractometer | 2057 reflections with I > 2σ(I) |
Radiation source: fine-focus sealed tube | Rint = 0.022 |
Graphite monochromator | θmax = 74.9°, θmin = 2.9° |
non–profiled ω–scans | h = −3→6 |
Absorption correction: ψ scan (North et al., 1968) | k = −11→11 |
Tmin = 0.76, Tmax = 0.92 | l = −19→19 |
4976 measured reflections | 2 standard reflections every 150 reflections |
3176 independent reflections | intensity decay: 3% |
Refinement
Refinement on F2 | Secondary atom site location: difference Fourier map |
Least-squares matrix: full | Hydrogen site location: inferred from neighbouring sites |
R[F2 > 2σ(F2)] = 0.068 | H atoms treated by a mixture of independent and constrained refinement |
wR(F2) = 0.231 | w = 1/[σ2(Fo2) + (0.11P)2 + 0.24P] where P = (Fo2 + 2Fc2)/3 |
S = 1.04 | (Δ/σ)max < 0.001 |
3176 reflections | Δρmax = 0.30 e Å−3 |
189 parameters | Δρmin = −0.19 e Å−3 |
15 restraints | Extinction correction: SHELXL97 (Sheldrick, 2008), Fc*=kFc[1+0.001xFc2λ3/sin(2θ)]-1/4 |
Primary atom site location: structure-invariant direct methods | Extinction coefficient: 0.009 (2) |
Special details
Geometry. All s.u.'s (except the s.u. in the dihedral angle between two l.s. planes) are estimated using the full covariance matrix. The cell e.s.d.'s are taken into account individually in the estimation of s.u.'s in distances, angles and torsion angles; correlations between s.u.'s in cell parameters are only used when they are defined by crystal symmetry. An approximate (isotropic) treatment of cell s.u.'s is used for estimating s.u.'s involving l.s. planes. |
Refinement. Refinement of F2 against ALL reflections. The weighted R-factor wR and goodness of fit S are based on F2, conventional R-factors R are based on F, with F set to zero for negative F2. The threshold expression of F2 > σ(F2) is used only for calculating R-factors(gt) etc. and is not relevant to the choice of reflections for refinement. R-factors based on F2 are statistically about twice as large as those based on F, and R-factors based on ALL data will be even larger. |
Fractional atomic coordinates and isotropic or equivalent isotropic displacement parameters (Å2)
x | y | z | Uiso*/Ueq | ||
O1 | 0.1419 (4) | 0.4031 (2) | 0.90111 (13) | 0.0701 (6) | |
O2 | −0.1063 (4) | 0.5365 (2) | 0.81579 (14) | 0.0702 (6) | |
O3 | 0.3293 (5) | 0.8086 (4) | 0.55078 (16) | 0.1061 (10) | |
O4 | 0.3031 (5) | 0.4665 (3) | 0.6140 (3) | 0.1242 (12) | |
N1 | 0.3154 (5) | 0.5683 (3) | 0.79670 (16) | 0.0609 (6) | |
H1 | 0.473 (6) | 0.541 (3) | 0.8167 (19) | 0.064 (8)* | |
C1 | 0.3263 (5) | 0.6871 (3) | 0.72419 (17) | 0.0553 (6) | |
H1A | 0.1667 | 0.6874 | 0.7012 | 0.066* | |
C2 | 0.5335 (5) | 0.6570 (3) | 0.65270 (18) | 0.0581 (7) | |
H2 | 0.6965 | 0.6633 | 0.6726 | 0.070* | |
C3 | 0.5268 (6) | 0.7669 (4) | 0.57095 (19) | 0.0649 (7) | |
C4 | 0.7610 (7) | 0.8120 (5) | 0.5160 (3) | 0.1017 (13) | |
H4A | 0.7268 | 0.8494 | 0.4589 | 0.153* | |
H4B | 0.8706 | 0.7291 | 0.5137 | 0.153* | |
H4C | 0.8396 | 0.8873 | 0.5391 | 0.153* | |
C5 | 0.5017 (6) | 0.5036 (4) | 0.6283 (2) | 0.0691 (8) | |
C6 | 0.7211 (7) | 0.4071 (4) | 0.6219 (3) | 0.0900 (11) | |
H6A | 0.6725 | 0.3140 | 0.6088 | 0.135* | |
H6B | 0.7871 | 0.3930 | 0.6758 | 0.135* | |
H6C | 0.8470 | 0.4515 | 0.5770 | 0.135* | |
C7 | 0.1002 (5) | 0.5061 (3) | 0.83558 (17) | 0.0548 (6) | |
C8 | −0.0754 (8) | 0.3217 (4) | 0.9476 (2) | 0.0914 (12) | |
H8A | −0.1578 | 0.2732 | 0.9086 | 0.110* | |
H8B | −0.1940 | 0.3873 | 0.9743 | 0.110* | |
C9 | 0.0159 (12) | 0.2109 (5) | 1.0147 (3) | 0.1292 (19) | |
H9A | 0.1200 | 0.1409 | 0.9873 | 0.194* | |
H9B | −0.1247 | 0.1611 | 1.0506 | 0.194* | |
H9C | 0.1111 | 0.2595 | 1.0493 | 0.194* | |
C10 | 0.3566 (5) | 0.8362 (3) | 0.75167 (17) | 0.0588 (7) | |
C11 | 0.5396 (6) | 0.8614 (3) | 0.8002 (2) | 0.0796 (9) | |
H11 | 0.6451 | 0.7851 | 0.8171 | 0.096* | |
C12 | 0.5704 (8) | 0.9968 (3) | 0.8243 (3) | 0.0980 (12) | |
H12 | 0.6966 | 1.0120 | 0.8566 | 0.118* | |
C13 | 0.4143 (8) | 1.1085 (4) | 0.8004 (3) | 0.1067 (15) | |
H13 | 0.4308 | 1.1995 | 0.8181 | 0.128* | |
C14 | 0.2344 (9) | 1.0878 (4) | 0.7509 (3) | 0.1055 (14) | |
H14 | 0.1319 | 1.1652 | 0.7331 | 0.127* | |
C15 | 0.2056 (7) | 0.9521 (3) | 0.7275 (2) | 0.0822 (10) | |
H15 | 0.0808 | 0.9382 | 0.6944 | 0.099* |
Atomic displacement parameters (Å2)
U11 | U22 | U33 | U12 | U13 | U23 | |
O1 | 0.0820 (15) | 0.0563 (11) | 0.0669 (12) | −0.0039 (10) | −0.0069 (10) | 0.0051 (9) |
O2 | 0.0492 (11) | 0.0760 (13) | 0.0806 (13) | −0.0023 (9) | −0.0063 (10) | 0.0021 (10) |
O3 | 0.0653 (15) | 0.159 (3) | 0.0856 (17) | 0.0111 (16) | −0.0218 (13) | 0.0192 (17) |
O4 | 0.0603 (15) | 0.115 (2) | 0.220 (4) | −0.0017 (14) | −0.0398 (19) | −0.079 (2) |
N1 | 0.0470 (13) | 0.0575 (13) | 0.0750 (15) | −0.0004 (10) | −0.0148 (11) | 0.0071 (11) |
C1 | 0.0428 (13) | 0.0567 (14) | 0.0633 (15) | 0.0001 (11) | −0.0069 (11) | 0.0010 (12) |
C2 | 0.0391 (13) | 0.0660 (16) | 0.0710 (16) | 0.0013 (11) | −0.0118 (12) | −0.0116 (13) |
C3 | 0.0503 (16) | 0.0802 (19) | 0.0655 (16) | 0.0004 (14) | −0.0103 (13) | −0.0128 (14) |
C4 | 0.071 (2) | 0.113 (3) | 0.108 (3) | −0.014 (2) | 0.003 (2) | 0.016 (2) |
C5 | 0.0503 (16) | 0.0778 (19) | 0.083 (2) | −0.0032 (14) | −0.0095 (14) | −0.0224 (16) |
C6 | 0.067 (2) | 0.086 (2) | 0.125 (3) | 0.0126 (18) | −0.016 (2) | −0.039 (2) |
C7 | 0.0602 (17) | 0.0465 (13) | 0.0571 (14) | −0.0002 (11) | −0.0058 (12) | −0.0076 (11) |
C8 | 0.108 (3) | 0.076 (2) | 0.080 (2) | −0.017 (2) | 0.008 (2) | 0.0016 (18) |
C9 | 0.195 (6) | 0.083 (3) | 0.092 (3) | −0.001 (3) | 0.011 (3) | 0.017 (2) |
C10 | 0.0480 (14) | 0.0566 (15) | 0.0660 (16) | 0.0041 (11) | 0.0049 (12) | −0.0026 (12) |
C11 | 0.070 (2) | 0.0651 (18) | 0.109 (3) | 0.0108 (15) | −0.0193 (18) | −0.0244 (18) |
C12 | 0.091 (3) | 0.074 (2) | 0.136 (3) | 0.002 (2) | −0.016 (2) | −0.039 (2) |
C13 | 0.106 (3) | 0.064 (2) | 0.142 (4) | 0.003 (2) | 0.020 (3) | −0.028 (2) |
C14 | 0.107 (3) | 0.068 (2) | 0.134 (4) | 0.028 (2) | −0.002 (3) | −0.006 (2) |
C15 | 0.073 (2) | 0.071 (2) | 0.097 (2) | 0.0179 (17) | −0.0054 (18) | −0.0011 (17) |
Geometric parameters (Å, º)
O1—C7 | 1.341 (3) | C6—H6B | 0.9600 |
O1—C8 | 1.450 (4) | C6—H6C | 0.9600 |
O2—C7 | 1.216 (3) | C8—C9 | 1.491 (6) |
O3—C3 | 1.196 (4) | C8—H8A | 0.9700 |
O4—C5 | 1.190 (4) | C8—H8B | 0.9700 |
N1—C7 | 1.331 (4) | C9—H9A | 0.9600 |
N1—C1 | 1.461 (3) | C9—H9B | 0.9600 |
N1—H1 | 0.97 (3) | C9—H9C | 0.9600 |
C1—C10 | 1.516 (4) | C10—C11 | 1.374 (3) |
C1—C2 | 1.529 (4) | C10—C15 | 1.375 (3) |
C1—H1A | 0.9800 | C11—C12 | 1.375 (3) |
C2—C3 | 1.526 (4) | C11—H11 | 0.9300 |
C2—C5 | 1.536 (4) | C12—C13 | 1.363 (3) |
C2—H2 | 0.9800 | C12—H12 | 0.9300 |
C3—C4 | 1.459 (5) | C13—C14 | 1.362 (3) |
C4—H4A | 0.9600 | C13—H13 | 0.9300 |
C4—H4B | 0.9600 | C14—C15 | 1.371 (3) |
C4—H4C | 0.9600 | C14—H14 | 0.9300 |
C5—C6 | 1.469 (5) | C15—H15 | 0.9300 |
C6—H6A | 0.9600 | ||
C7—O1—C8 | 116.4 (3) | O2—C7—N1 | 126.0 (3) |
C7—N1—C1 | 122.2 (2) | O2—C7—O1 | 123.9 (3) |
C7—N1—H1 | 121.8 (18) | N1—C7—O1 | 110.1 (2) |
C1—N1—H1 | 116.0 (18) | O1—C8—C9 | 107.0 (4) |
N1—C1—C10 | 112.0 (2) | O1—C8—H8A | 110.3 |
N1—C1—C2 | 109.9 (2) | C9—C8—H8A | 110.3 |
C10—C1—C2 | 112.1 (2) | O1—C8—H8B | 110.3 |
N1—C1—H1A | 107.6 | C9—C8—H8B | 110.3 |
C10—C1—H1A | 107.6 | H8A—C8—H8B | 108.6 |
C2—C1—H1A | 107.6 | C8—C9—H9A | 109.5 |
C3—C2—C1 | 111.4 (2) | C8—C9—H9B | 109.5 |
C3—C2—C5 | 106.9 (2) | H9A—C9—H9B | 109.5 |
C1—C2—C5 | 110.7 (2) | C8—C9—H9C | 109.5 |
C3—C2—H2 | 109.3 | H9A—C9—H9C | 109.5 |
C1—C2—H2 | 109.3 | H9B—C9—H9C | 109.5 |
C5—C2—H2 | 109.3 | C11—C10—C15 | 117.4 (3) |
O3—C3—C4 | 121.1 (3) | C11—C10—C1 | 121.3 (2) |
O3—C3—C2 | 119.5 (3) | C15—C10—C1 | 121.3 (3) |
C4—C3—C2 | 119.3 (3) | C10—C11—C12 | 121.6 (3) |
C3—C4—H4A | 109.5 | C10—C11—H11 | 119.2 |
C3—C4—H4B | 109.5 | C12—C11—H11 | 119.2 |
H4A—C4—H4B | 109.5 | C13—C12—C11 | 119.4 (4) |
C3—C4—H4C | 109.5 | C13—C12—H12 | 120.3 |
H4A—C4—H4C | 109.5 | C11—C12—H12 | 120.3 |
H4B—C4—H4C | 109.5 | C14—C13—C12 | 120.4 (4) |
O4—C5—C6 | 121.7 (3) | C14—C13—H13 | 119.8 |
O4—C5—C2 | 119.8 (3) | C12—C13—H13 | 119.8 |
C6—C5—C2 | 118.5 (3) | C13—C14—C15 | 119.5 (4) |
C5—C6—H6A | 109.5 | C13—C14—H14 | 120.2 |
C5—C6—H6B | 109.5 | C15—C14—H14 | 120.2 |
H6A—C6—H6B | 109.5 | C14—C15—C10 | 121.6 (3) |
C5—C6—H6C | 109.5 | C14—C15—H15 | 119.2 |
H6A—C6—H6C | 109.5 | C10—C15—H15 | 119.2 |
H6B—C6—H6C | 109.5 |
Hydrogen-bond geometry (Å, º)
D—H···A | D—H | H···A | D···A | D—H···A |
N1—H1···O2i | 0.97 (3) | 2.26 (3) | 3.180 (4) | 158 (2) |
Symmetry code: (i) x+1, y, z.
Footnotes
Supplementary data and figures for this paper are available from the IUCr electronic archives (Reference: RK2414).
References
- Enraf–Nonius (1994). CAD-4 EXPRESS Enraf–Nonius, Delft, The Netherlands.
- Harms, K. & Wocadlo, S. (1995). XCAD4 University of Marburg, Germany.
- Hatano, M., Maki, T., Moriyama, M., Arinobe, M. & Ishihara, K. (2008). J. Am. Chem. Soc. 130, 16858–16860. [DOI] [PubMed]
- Kuzmina, O. M., Volov, A. N., Albov, D. V., Fitch, A. N., Chernyshev, V. V., Shutalev, A. D., Tsivadze, A. Yu., Savinkina, E. V. & Zamilatskov, I. A. (2013). Tetrahedron Lett. Submitted.
- Macrae, C. F., Edgington, P. R., McCabe, P., Pidcock, E., Shields, G. P., Taylor, R., Towler, M. & van de Streek, J. (2006). J. Appl. Cryst. 39, 453–457.
- North, A. C. T., Phillips, D. C. & Mathews, F. S. (1968). Acta Cryst. A24, 351–359.
- Sheldrick, G. M. (2008). Acta Cryst. A64, 112–122. [DOI] [PubMed]
- Spek, A. L. (2009). Acta Cryst. D65, 148–155. [DOI] [PMC free article] [PubMed]
Associated Data
This section collects any data citations, data availability statements, or supplementary materials included in this article.
Supplementary Materials
Crystal structure: contains datablock(s) I, 1R. DOI: 10.1107/S1600536813024884/rk2414sup1.cif
Structure factors: contains datablock(s) I. DOI: 10.1107/S1600536813024884/rk2414Isup2.hkl
Supplementary material file. DOI: 10.1107/S1600536813024884/rk2414Isup3.cml
Additional supplementary materials: crystallographic information; 3D view; checkCIF report