Figure 3.

Results of Simulations by using Long Reads with High Error Rates

The x axis shows the sequence coverage and the y axis shows the mean switch distance. Beagle and SHAPEIT2 were run without any phase informative reads (0×) and these results are plotted as gray and black points respectively. The results are shown for different lengths of reads: 100 bp reads with 300 bp insert (green), 5 kb single reads (orange), 10 kb single reads (blue), and 20 kb single reads (pink). Two different base error rates were used in the simulations: 15% (dashed line) and 4% (solid line).