Table 2.
Population |
n |
Gene, SNP (Reference Allele) |
Frequency |
phwe | pobs | padj | OR (95%CI) | ||
---|---|---|---|---|---|---|---|---|---|
Cases | Controls | Case | Control | ||||||
GeneID Discovery | 860 | 707 | IL33, rs7025417T | 0.585 | 0.516 | 0.259 | 1.02 × 10−4 | 1.38 × 10−4 | 1.32 (1.14–1.52) |
IL1RL1, rs11685424G | 0.567 | 0.515 | 0.293 | 3.63 × 10−3 | 2.12 × 10−3 | 1.25 (1.08–1.44) | |||
GeneID Validation | 575 | 471 | IL33, rs7025417T | 0.584 | 0.486 | 0.4 | 7.42 × 10−6 | 7.69 × 10−6 | 1.49 (1.25–1.77) |
IL1RL1, rs11685424G | 0.57 | 0.487 | 0.453 | 1.48 × 10−4 | 1.25 × 10−4 | 1.40 (1.18–1.67) | |||
GeneID Replication 1 | 2,016 | 1,647 | IL33, rs7025417T | 0.589 | 0.528 | 0.008 | 2.28 × 10−7 | 2.32 × 10−7 | 1.28 (1.16–1.40) |
IL1RL1, rs11685424G | 0.566 | 0.483 | 0.776 | 1.08 × 10−12 | 1.15 × 10−12 | 1.40 (1.28–1.53) | |||
GeneID Replication 2 | 1,070 | 1,984 | IL33, rs7025417T | 0.594 | 0.497 | 0.367 | 4.39 × 10−13 | 1.06 × 10−12 | 1.47 (1.33–1.66) |
IL1RL1, rs11685424G | 0.579 | 0.481 | 0.118 | 1.65 × 10−13 | 2.17 × 10−13 | 1.49 (1.34–1.65) | |||
GeneID Combined | 4,521 | 4,809 | IL33, rs7025417T | 0.591 | 0.509 | 0.001 | 1.41 × 10−27 | 1.19 × 10−28 | 1.39 (1.31–1.47) |
IL1RL1, rs11685424G | 0.573 | 0.487 | 0.027 | 6.25 × 10−30 | 6.93 × 10−30 | 1.40 (1.32–1.48) | |||
GeneID Anatomical CAD | 1,598 | 4,809 | IL33, rs7025417T | 0.579 | 0.509 | 0.001 | 6.06 × 10−12 | 3.79 × 10−11 | 1.32 (1.22–1.44) |
IL1RL1, rs11685424G | 0.565 | 0.487 | 0.027 | 2.37 × 10−14 | 2.73 × 10−13 | 1.36 (1.25–1.48) | |||
GeneID Clinical CAD | 2,923 | 4,809 | IL33, rs7025417T | 0.594 | 0.509 | 0.001 | 2.19 × 10−24 | 8.57 × 10−22 | 1.39 (1.30–1.49) |
IL1RL1, rs11685424G | 0.573 | 0.487 | 0.027 | 4.73 × 10−25 | 9.48 × 10−22 | 1.39 (1.30–1.49) |
Abbreviations are as follows: phwe, p value from Hardy-Weinberg equilibrium tests; pobs, observed p value; padj, p value adjusted by covariates; OR, odds ratio after adjustment.