Table 1. Global statistics of the M. notabilis genome sequencing and assembly.
Assembling processing | Insert size (bp) | Read length (bp) | Raw data (MB) | Effective data (MB) | Sequence coverage | N50*(bp) | Total length (bp) |
---|---|---|---|---|---|---|---|
Contig and scaffold | 170–800 | 100 | 76,884.40 | 54,625.60 | 165.14 | 5,719 | 280,787,257 |
Scaffold | 2,000–20,000 | 49 | 49,803.50 | 23,713.73 | 71.69 | 394,221 | 332,102,025 |
Gap-closure | 170–800 | 100 | 76,884.40 | 54,625.60 | — | — | — |
Final result | — | — | 126,687.90 | 78,339.33 | 236.82 | 390,115 | 330,791,087 |
*N50 refers to the size above which half of the total length of the sequence is found.