Table 3. TREK family members expression in cancer.
Gene | Cancer | Subtype | Above threshold analyses | Median value | ||||||
p-value | Fold change | % | Ref | p-value | Gene rank | n | ||||
KCNK2 | Breast | Invasive | ↓ | 5.70E-05 | −2.23 | 4 | [19] | 0.349 | 8095 | 11 |
Lung | Squamous cell | ↑ | 2.98E-04 | 2.111 | 5 | [48] | 0.696 | 6505 | 5 | |
KCNK10 | Brain | Glioblastoma | ↓ | 1.81E-17 | −4.843 | 5 | [9] | 5.03E-05 | 908 | 5 |
↓ | 1.56E-10 | −2.974 | 6 | [10] | ||||||
↑ | 8.63E-04 | 2.547 | 7 | [5] | ||||||
Breast | Ductal | ↓ | 1.00E-03 | −2.294 | 2 | [18] | 0.15 | 6686.5 | 10 | |
↓ | 3.85E-04 | −3.523 | 2 | [14] | ||||||
Colorectal | Adenocarcinoma | ↓ | 1.74E-25 | −7.227 | 1 | [26] | 8.12E-07 | 372.5 | 14 | |
↓ | 3.19E-22 | −7.914 | 2 | [26] | ||||||
↓ | 2.85E-18 | −6.275 | 1 | [26] | ||||||
↓ | 2.07E-14 | −4.83 | 2 | [26] | ||||||
↓ | 1.11E-07 | −6.275 | 2 | [26] | ||||||
↓ | 3.42E-07 | −2.503 | 3 | [26] |
The above threshold data for TREK family members; KCNK2 and KCNK10 is shown. Data is divided into each cancer type and subtypes within that cancer. The p-value, fold change and gene rank percentile (%) for data which scored above threshold values (p-value<0.05, fold change >2 and gene rank percentile <10%) are shown. Comparative meta-analysis was performed using all available analyses for a given cancer subtype which provides median gene rank and median p-value. Overexpression ↑ and underexpression ↓ are indicated.