|
CH991763∶266007-267494_R |
P23-like domain, similar to GL50581_3538 figGiardiaintestinalis ATCC 50581] |
new gene, similar to other assemblage |
|
CH991763∶264707-265966_R |
IFT complex B, GL p15, re-annotate GL50803_40995 |
gene to be re-annotated |
|
CH991817∶18,017-18,463 |
Hypothetical protein, re-annotate GL50803_25713 |
gene to be re-annotated |
|
CH991814∶252,697-256,896 |
Hypothetical protein GL P15/kinase protein |
new gene/conserved domain |
|
CH991803∶2702-4543 |
VSP, similar to GL50803_114065 |
gene repeat/conserved domain, FU-like and VSP domains,re-annotate GL50803_102540 |
|
CH991798∶30,210-30,809 |
ribosomal protein S11 |
re-annotate (GL50803_14827) 199AA instead of 154, similarto other assemblage |
|
CH991782∶26,231-28,138_R |
VSP, conserved domain |
635 instead of 195 AA, original gene GL50803-101380,gene to be re-annotated |
|
CH991779∶250938-252914 -R |
VSP, conserved domain |
gene repeat |
|
CH991779∶569,674-571,152 |
VSP, conserved domain |
new gene |
|
CH991779∶1,223,042-1,223,698 |
Hypothetical protein, GL P15 |
new gene, similar to other assemblage |
|
CH991779∶1,425,747-1,427,552 |
VSP, conserved domain |
gene to be re-annotated, re-annotate GL50803_40630 |
|
CH991785∶11,532-11,867_R |
SORL conserved domain, hypothetical protein GL P15 |
new gene |
|
CH991776∶59,721-59,930 |
ribosomal S30 conserved domain |
new gene |
|
CH991771∶171,536-171,874_R(112AA) |
similar to hypothetical protein GL50803_32738 |
gene repeat |
|
CH991769∶78,752-81,292 |
hypothetical protein, two conserved domains |
new gene, similar to other assemblage GL P15 |
|
CH991769∶412,442-413,248 |
similar to reverse transcriptase |
gene repeat |
|
CH991769∶624,472-624,627 |
50S ribosomal protein L39e |
new gene |
|
CH991769∶770,102-771,508 |
hypothetical protein |
similar gene/gene repeat, similar to other assemblageGL P15/hypothetical GL50803_17273 |
|
CH991768∶744,494-745,936 |
Hypothetical protein |
new gene similar to similar to other assemblageGL P15 |
|
CH991768∶1,281,692-1,282,111-R |
GL P15, Ribosomal protein S19e domain conserved |
new gene-reverse strand, CH991768∶1,281,692-1,282,111-R |
|
CH991764∶147,549-148,025_R |
partially similar to hypothetical protein GL50803_20672 |
new gene |
|
CH991764∶148,024-149,931 |
VSP conserved domain, |
new gene |
| ,CH991762∶115,657-116,463 |
ANK conserved domain |
new gene/gene repeat, similar to GL P15, Ser/Thrprotein kinase |
|
CH991761∶101,085-102,872 |
VSP conserved domain, similar GL50803_116477 |
gene repeat, re-annotate GL50803_135831 |
|
CH991761∶113,307-113,858 |
VSP conserved domain |
gene repeat |
|
CH991761∶113,432-113,770_R |
similar to hypothetical protein GL50803_105806 |
gene repeat |
|
CH991761∶295,809-301,103 |
Hypothetical protein, GL P15, conserved domain WD40 |
new gene, partially similar to Hypothetical protein(GL50803_113673) |
|
CH991763∶4,689-7,532_R |
conserved domain, Ankyrin-like and protein kinase |
gene repeat, similar to GL50803_113094 |
|
CH991763∶689121-689569 |
partially similar to GL50803_101496 |
partial gene repeat |
|
CH991763∶688,749-688,942_R |
partially similar to GL50803_137676, kinase |
partial gene repeat |
|
CH991767∶1667698-1667877 |
conserved domain, Ferredoxin Fd1, Fd2 |
partial gene repeat |
|
CH991761∶301,967-303,142 |
conserved domain, NEK, kinase-like |
new gene/gene repeat |
|
CH991761∶302,965-305,298 |
ANK conserved domain, similar to kinase |
new gene |
|
CH991763∶1395469-1397541_R |
VSP conserved domain, similar to High cysteine membraneprotein Group 1 (GL50803_91707) |
new gene |
|
CH991767∶885323-886138 |
VSP domain, similar to P15 |
partial gene repeat |
|
CH991767∶1127974-1130037_R |
VSP domain, similar to P15 |
new gene |
|
CH991767∶1130397-1135277 |
hypothetical protein, similar to P15 |
new gene |
|
CH991767∶1135382-1140265 |
conserved domains, chromosome segregation protein SMC, similar to Axoneme-associated protein GASP-180 |
gene repeat |
|
CH991767∶1140362-1145860 |
re-annotate GL50803_32999 to be similar to P15 (GLP15_1881) |
many conserved domains |
|
CH991767∶1146036-1147784 |
conserved ANK domain, Coiled-coil protein [Giardia intestinalis ATCC 50581], Hypothetical protein GL50803_41212 |
new gene |
|
CH991767∶1696020-1696778 |
conserved ANK domain and zinc finger, similar to GL50803_113284 hypothetical protein and Protein 21.1 P15 |
gene repeat |
|
CH991793∶23497-23754 |
ORF with low similarity |
new gene, well expressed in RNA-seq |
|
CH991763∶1,306,665-1,307,180 |
ORF with low similarity |
new gene, expressed in RNA-seq |
|
CH991776∶157233-158693 |
conserved ANK and kinase domains, partially similar to?NEK (GL50803_93221) |
new gene/gene repeat |
|
CH991762∶387,382-387,645 |
partially similar to hypothetical protein GL50803_38965 |
partial gene repeat |
|
CH991763∶692,405-692,956 |
partially similar to GL50803_31921, |
new gene |
|
CH991763∶692571-693002 |
partially similar to hypothetical protein GL50803_5692 |
new gene |
|
CH991767∶340089-340346 |
mostly retrotransposon |
gene repeat/new gene |
|
CH991767∶436,937-437,701_R |
similar to VSP,(GL50803_111732) |
gene repeat |
|
CH991767∶435261-437231 |
similar to high cysteine membrane protein EGF-like (GL50803_114626) |
gene repeat |
|
CH991782∶818,861-820,612 |
similar to P15 and 50581 strains |
re-annotate GL50803_40224 |
|
CH991761∶20575-22203 |
similar to P15 and 50581 strains |
re-annotate GL50803_96616 |
|
CH991767∶1,732,248-1,734,773 |
similar to P15 and 50581 strains |
re-annotate GL50803_39210 |
|
CH991779∶262026-264188 |
similar to P15 and 50581 strains |
re-annotate GL50803_35276 |
|
CH991776∶21991-23994 |
similar to P15 and 50581 strains |
re-annotate GL50803_34684 |
|
CH991779∶1223042-1223698 |
new hypothetical protein, conserved among 3 assemblages |
new gene, expressed in in RNA-seq |
|
CH991769∶937870-939393 |
new hypothetical protein, conserved among 3 assemblages, conserved Ribophorin I domain |
new gene, expressed in in RNA-seq |
|
CH991814∶199061-199591 |
similar to GL50803_114246, GTP-binding protein, putative |
partial gene repeat |
|
CH991779∶1,155,366-1,156,079_R |
similar to Rossmann-fold protein [Giardia lamblia P15],conserved putative domain |
new gene |
|
CH991769∶2,224-3,885_R |
similar to hypothetical protein GLP15_2551 |
new gene |
|
CH991769∶953,848-955,386_R |
similar to P15 hypothetical protein |
re-annotate GL50803_7035 |
|
CH991763∶1385753-1387552_R |
similar to hypothetical protein in P15 and 50581 strains |
new gene |
|
CH991779∶681,867-683,660_R |
similar to P15 and 50581 strains |
re-annotate GL50803_2822 |
|
CH991776∶278,076-279,610_R |
PTZ00382 conserved domain |
re-annotate GL50803_97233, well expressed in RNA-seq |
|
CH991769∶77,021-78,700 |
new hypothetical protein, similar to P15 and 50581 |
new gene |
|
CH991769∶56,305-56,718_R |
new hypothetical protein, similar to P15 and 50581 |
new gene |
|
CH991767∶707,305-707,724_R |
new hypothetical protein, similar to hypothetical protein GLP15_3559 |
new gene |
|
CH991769∶334626-334943_R |
Gene repeat, Giardia lamblia ATCC 50803 Pam18p (GL50803_300001) |
gene repeat |
|
CH991767∶707,305.707,724_R |
similar to hypothetical protein GLP15_3559 |
new gene |
|
CH991776∶310,552-313,605_R |
new hypothetical protein, similar to P15 and 50581 |
new gene |
|
CH991814∶296,825-303,154_R |
new hypothetical protein, similar to P15 and 50581 |
new gene |
|
CH991769∶494114-494923 |
new hypothetical protein, similar to P15 and 50581 |
new gene |
|
CH991814∶275,394-281,945 |
similar to Kinase [Giardia lamblia P15], multiple conserved domain |
new gene |
|
CH991779∶986627-987556_R |
similar to Kinase GL50803_101307 and GL50803_86934 |
gene repeat |
|
CH991793∶39014-40039_R |
new hypothetical protein, similar to P15 and 50581 |
new gene |
|
CH991763∶195,962-199,271_R |
similar to P15 and 50581 strains |
re-annotate GL50803_32861 |
|
CH991780∶48,596-52,006_R |
similar to P15 and 50581 strains |
re-annotate GL50803_41369 |
|
CH991763∶487,379-487,747 |
new hypothetical protein, similar to P15 and 50581 |
new gene |
|
CH991767∶1652396-1654378 |
similar to P15 and 50581 strains |
re-annotate GL50803_41311 |
|
CH991771∶3728-4342 |
similar to GLP15_4099 |
re-annotate GL50803_40244 |
|
CH991767∶473391-475715_R |
similar toGLP15_5080 and GL50581_209 |
re-annotate GL50803_36426 |
|
CH991769∶546414-550226_R |
similar to GLP15_5033 and GL50581_4447 |
re-annotate GL50803_103205 |
|
CH991776∶41095-43620_R |
similar to GLP15_3901 |
re-annotate GL50803_39904 |
|
CH991768∶596,759-597,880_R |
similar to P15 and 50581 strains |
re-annotate GL50803_30448 |
