Table 2.
Noncentrality Parameters and Powers for Testing for Maternally Mediated Genetic Effects by Using LRTs Based on Either Grandparents, Parents, or a Mother and Her Parents
χ2 Noncentrality Parameter (Power)b for |
|||||
Parental Asymmetry Testd with |
Maternal Grandparents Teste with |
||||
Scenarioa | Grandparental Asymmetry Testc with 1 df | 1 df | 2 df | 1 df | 2 df |
1, 1, 1, 1 | .0000 (.05) | .0000 (.05) | .0000 (.05) | .0000 (.05) | .0000 (.05) |
2, 2, 1, 1 | .0000 (.05) | .0000 (.05) | .0000 (.05) | .0103 (.30) | .0104 (.23) |
1, 1, 2, 2 | .0212 (.54) | .0381 (.79) | .0400 (.72) | .0368 (.77) | .0408 (.73) |
1, 1, 3, 3 | .0603 (.93) | .1030 (1.00) | .1078 (.99) | .0969 (.99) | .1098 (.99) |
1, 1, 2, 4 | .0283 (.66) | .0492 (.88) | .0492 (.81) | .0498 (.88) | .0498 (.81) |
1, 1, 3, 9 | .0859 (.99) | .1375 (1.00) | .1375 (1.00) | .1424 (1.00) | .1424 (1.00) |
1, 1, 1, 2 | .0003 (.06) | .0006 (.06) | .0027 (.09) | .0006 (.06) | .0040 (.12) |
1, 1, 1, 3 | .0012 (.08) | .0023 (.10) | .0083 (.19) | .0025 (.11) | .0127 (.28) |
The numbers denoting each scenario represent R1, R2, S1, and S2, respectively.
The χ2 noncentrality parameter is found by multiplying the entry in the table by the number of families to be studied. Example powers (for a level-.05 test) are given in parentheses for studies with 200 families. Calculations assumed a stratified population in which half have a baseline risk of .01 and an allele prevalence of .05 and the other half have a baseline risk of .03 and an allele prevalence of .10.
Test 1.
Wilcox et al. 1998.
Mitchell 1997.