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. 2013 Oct 9;8(10):e75606. doi: 10.1371/journal.pone.0075606

Table 3. ITS2 profiles of pearls from Pinctada margaritifera (PMR), P. maxima (PMX) and P. radiata (PR) using a practically non-destructive method (Fig. 2C).

Pearl label Pearl weight (carats/mg) Sample weight (mg) ITS2 direct PCRa ITS2 nested PCRa ITS2-RFLP PMR, PMX or PR ITS2 nested PCRa
PMR7 6.7/1335 43 no no no no
PMR8 7.5/1511 45 yes yes yes yes
PMR9 7.9/1588 60 yes yes yes yes
PMR10 12.2/2441 61 yes yes yes yes
PMR11 11.5/2307 59 yes yes yes yes
PMR12 9.7/1934 59 yes yes yes yes
PMR13 10.2/2048 74 yes yes yes yes
PMR14 6.5/1310 75 yes yes yes yes
PMR15 15.9/3190 50 yes yes yes yes
PMR16 12.3/2464 39 yes yes yes yes
PMR17 6.7/1335 71 yes yes yes yes
PMR18 7.5/1511 100 yes yes yes yes
92% (11/12)b 92% (11/12) 92% (11/12) 92% (11/12)
PMX7 11.6/2320 90 no no no no
PMX8 15.6/3120 50 no no no yes
PMX9 6.4/1290 20 no no no yes
PMX10 7.2/1450 60 no yes yes yes
PMX11 18.6/3720 110 no yes yes yes
PMX12 20.2/4030 90 no no no no
PMX13 12.4/2470 100 no no no no
PMX14 17.4/3480 70 no no no no
PMX15 12.0/2400 60 no no no no
PMX16 12.1/2420 100 no yes yes yes
PMX17 10.4/2080 70 no yes yes yes
PMX18 9.3/1860 40 no yes yes yes
0% (0/12)b 42% (5/12) 42% (5/12) 58% (7/12)
PR7 6.9/1380 40 no yes yes yes
PR8 4.9/970 20 no yes yes yes
PR9 4.7/940 10 no yes yes yes
PR10 6.0/1210 13 no yes yes yes
PR11 6.1/1220 40 no no no yes
PR12 5.4/1080 33 no yes yes yes
PR13 6.5/1310 40 no yes yes yes
PR14 6.2/1240 20 no no no yes
PR15 7.0/1400 20 no no no yes
PR16 5.2/1050 20 no yes yes yes
PR17 4.2/850 20 no yes yes yes
PR18 5.1/1020 20 no no no no
0% (0/12)b 67% (8/12) 67% (8/12) 92% (11/12)
a

direct PCR was conducted using ITS2 universal primers (5.8S-F and 28S-R). Nested PCR was conducted with the universal ITS2 primers or primer pair 28S-R and Pinctada-specific forward primers internal to the ITS2 fragment (ITS2-Marg-F, ITS2-Max-F or ITS2-Rad-F).

b

percentage of successfully identified pearls (identified pearls/total pearls tested).