Table 1.
BLAST results for repetitive DNA sequences of Saccharum officinarum
| Gene bank N. | Clone name | Repetitive in: sorghum/maize/rice | Order | Superfamily | Family | e-value |
|---|---|---|---|---|---|---|
| JX101444 | Soff.a2 | y/n/n | LTR | Copia | Maximus/Sire | 3e-125 |
| JX101454 | Soff.a4 | *y/n/n | LTR | Copia | Maximus/Sire | 1e-08 |
| JX101446 | Soff.a9 | y/n/n | LTR | Copia | Maximus/Sire | 2e-37 |
| JX101450 | Soff.b7 | y/y/y | LTR | CopiaGypsy | Maximus/SireDEL/TEKAY | 5e-48 |
| JX101445 | Soff.b11 | n/n/y | LTR | Copia | Maximus/Sire | 8e-66 |
| JX101451 | Soff.b12 | **y/y/n | LTR | Copia | Maximus/Sire | 9e-125 |
| JX101443 | Soff.c3 | n/y/n | LTR | Gypsy | DEL/TEKAY | 4e-59 |
| JX101452 | Soff.d8 | y/y/n | LTR | Copia | Maximus/Sire | 5e-28 |
| JX101453 | Soff.d11 | y/y/n | LTR | Copia | Maximus/Sire | 1e-63 |
| JX101448 | Soff.e4 | y/y/y | LTR | Copia | Maximus/Sire | 8e-180 |
| JX101455 | Soff.e6 | y/n/n | LTR | Copia | Maximus/Sire | 1e-48 |
| JX101442 | Soff.f2 | y/y/y | LTR | Gypsy | DEL/TEKAY | 1e-77 |
| JX101456 | Soff.a10 | n/n/n | - | - | - |
*
Only chromosome #3;
**
only chromosomes #3, 5, 6 and 7.