Table 3. Prediction of the Epitope Domains in the E1-E2 Regions of the 28 Egyptian Strains .

Score	Epitope Domains of Egpytian stains	Positiona	Epitope Domains classes
	OW1…..OW28		H2-Db
	4a		Nonamer
24	S W H I N R T A L	420
	OW1…..OW28		H2-kD
	4a		Nonamer
24	H Y A P R P C G I	490
	OW1…..OW3		HLA-A*26
	OW6…..OW28		Nonamer
	4a
26	K V I L V L F L F	371
	OW4,OW5
28	K V I L I L F L F	371
	OW1…..OW28		HLA-B*1402
	4a		Nonamer
25	E R L A S C K S L	455
	OW1…..OW23		HLA-B*2705
	OW25…..OW28		Nonamer
24	E R L A S C K S L	455
	OW24
25	E R L A S C K N L	455
	4a
23	E R L A C C K S L	455
	OW1…..OW28		HLA-A*0201
26	R I P G T L V D L	340	Nonamer
	4a
24	R I P T T L V D L	340
	OW1…..OW4
	OW27
19	L F A G G H W G V	348
	OW5…..OW26
	OW28
29	L L A G G H W G V	348
	4a
27	L L S G G H W G V	348
	OW1…..OW3
	OW6…..OW9
	OW12…..OW28
	4a
21	L V L F L F A G V	374
	OW4,OW5
	OW10,.OW11
26	L I L F L F A G V	374

^a Only scores > 23 are considered