Abstract
Molecular analysis of clinical samples has been hampered by the lack of fresh or frozen specimens and the presence of contaminating background cells within samples obscuring the molecular analysis of the pathological cells of interest. Routine cytology specimens are a ubiquitous and abundant, yet largely untapped, source of clinical samples for molecular analysis. Morphologically defined single cells from peripheral blood smears can be microdissected from contaminating background cells and their whole genome amplified by primer extension preamplification, followed by polymerase chain reaction analysis of the specific DNA of interest. Thus, molecular information can be traced back to the cell of origin in these clinical specimens. This should allow studies on clonality, loss of heterozygosity, mutation, or amplification of multiple loci from one single cell in haematological smears and possibly other clinical cytology specimens.
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- Barrett M. T., Reid B. J., Joslyn G. Genotypic analysis of multiple loci in somatic cells by whole genome amplification. Nucleic Acids Res. 1995 Sep 11;23(17):3488–3492. doi: 10.1093/nar/23.17.3488. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Behrmann I., Walczak H., Krammer P. H. Structure of the human APO-1 gene. Eur J Immunol. 1994 Dec;24(12):3057–3062. doi: 10.1002/eji.1830241221. [DOI] [PubMed] [Google Scholar]
- Bennett J. M., Catovsky D., Daniel M. T., Flandrin G., Galton D. A., Gralnick H. R., Sultan C. The morphological classification of acute lymphoblastic leukaemia: concordance among observers and clinical correlations. Br J Haematol. 1981 Apr;47(4):553–561. doi: 10.1111/j.1365-2141.1981.tb02684.x. [DOI] [PubMed] [Google Scholar]
- Emmert-Buck M. R., Bonner R. F., Smith P. D., Chuaqui R. F., Zhuang Z., Goldstein S. R., Weiss R. A., Liotta L. A. Laser capture microdissection. Science. 1996 Nov 8;274(5289):998–1001. doi: 10.1126/science.274.5289.998. [DOI] [PubMed] [Google Scholar]
- Hubert R., Weber J. L., Schmitt K., Zhang L., Arnheim N. A new source of polymorphic DNA markers for sperm typing: analysis of microsatellite repeats in single cells. Am J Hum Genet. 1992 Nov;51(5):985–991. [PMC free article] [PubMed] [Google Scholar]
- Klimek F., Mayer D., Bannasch P. Biochemical microanalysis of glycogen content and glucose-6-phosphate dehydrogenase activity in focal lesions of the rat liver induced by N-nitrosomorpholine. Carcinogenesis. 1984 Feb;5(2):265–268. doi: 10.1093/carcin/5.2.265. [DOI] [PubMed] [Google Scholar]
- Kristjansson K., Chong S. S., Van den Veyver I. B., Subramanian S., Snabes M. C., Hughes M. R. Preimplantation single cell analyses of dystrophin gene deletions using whole genome amplification. Nat Genet. 1994 Jan;6(1):19–23. doi: 10.1038/ng0194-19. [DOI] [PubMed] [Google Scholar]
- Snabes M. C., Chong S. S., Subramanian S. B., Kristjansson K., DiSepio D., Hughes M. R. Preimplantation single-cell analysis of multiple genetic loci by whole-genome amplification. Proc Natl Acad Sci U S A. 1994 Jun 21;91(13):6181–6185. doi: 10.1073/pnas.91.13.6181. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zhang L., Cui X., Schmitt K., Hubert R., Navidi W., Arnheim N. Whole genome amplification from a single cell: implications for genetic analysis. Proc Natl Acad Sci U S A. 1992 Jul 1;89(13):5847–5851. doi: 10.1073/pnas.89.13.5847. [DOI] [PMC free article] [PubMed] [Google Scholar]
- Zhuang Z., Roth M. J., Emmert-Buck M. R., Lubensky I. A., Liotta L. A., Solomon D. Detection of the von Hippel-Lindau gene deletion in cytologic specimens using microdissection and the polymerase chain reaction. Acta Cytol. 1994 Sep-Oct;38(5):671–675. [PubMed] [Google Scholar]



